| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yeaC [H]
Identifier: 218883905
GI number: 218883905
Start: 556449
End: 557402
Strand: Direct
Name: yeaC [H]
Synonym: DKAM_0594
Alternate gene names: 218883905
Gene position: 556449-557402 (Clockwise)
Preceding gene: 218883886
Following gene: 218883906
Centisome position: 40.76
GC content: 45.18
Gene sequence:
>954_bases ATGCATCTGGGGGTTTTAATGGGTTTTTATAGCAGTATTAAGAAAATCCTGGTCGATGATGAATTGCTTATTGAGAAAGA GAAAGAGCTCAGGATTATTATTGCATCAATACTCGCTAAGGGACACATGATAATGGAGGGTGTCCCGGGTGTTGCTAAAA CCTATACTGCTAAAGCTGTTTCAAAACTCCTTGACTTAGAGTTTAAACGGGTTCAAATGACCCCGGATCTACTACCATCG GATATAATAGGCTATTATGTATTCGACCAGAAAACCGGGGGGTTTATCGTTAAGAAAGGACCTGTTTTCACCAATATTCT TTTAGCCGACGAGATCAACAGAGCCTCCCCCAGAACACAGTCAGCATTACTTGAGGCTATGCAGGAGAGGCAGGTGACTA TTGAAGGCGAGACATATAGGCTCCCGGAGCCCTTCATAGTTATAGCAACAATGAACCCCGTGGAGATGGAGGGTGTGTTC CCGCTTCCAGAGGCACAGCTGGATAGATTCCTCGTTAAAGTGGAAACCAGTTATACTTCTCACGTAGGCTTGGTTAAAAT ACTTAAGAGATCCGATGAGATCGAGAAAGCTATCAACGAGCTTAAACCAGTTGTCTCCCGCCAGGAGATACTAGAGGAAA TTAATAGGGTTACAAGTATTAAGGTGGATGAGTCAATCTATGACTACGTTGCCTCAATAATCGAGGAGACTCGTAGGCAT CCAGCAGTGAGGCTCGGTGGCTCGCCTAGGGCTGGGATAGCATTAATCAAGCTGGCTAGGTCACTGGCGTACATTGAGGG GAGAAACTATGTTATACCCGATGATGTCAAGGAGGCATGTAAACCAGTGCTACTGCATAGATTGATCCTCAAGCCCGAGT ATGAGGTGCAGGGATTGAGCGTTGAAAGAGTAATCGATGATGTCTTATCCAGTGTTAAGGTGCCCTCTCCATGA
Upstream 100 bases:
>100_bases TTTATGAAATTACAGCTGAAAGCCTCATCCTTTAGGACGGAAGAAAGTCAGCAATTAATATTAATTAAGGAGCATTGCTC ATAGAGTAATACAGCCTCAA
Downstream 100 bases:
>100_bases AGAGCCTATTCATAATATCTATAGCCTTGGTAATTATTACAGCGTCAACTCCTCTAGCACCTATTGCTGAGGACAGGCAT ACAGCTGGGTTCCCGAATCA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MHLGVLMGFYSSIKKILVDDELLIEKEKELRIIIASILAKGHMIMEGVPGVAKTYTAKAVSKLLDLEFKRVQMTPDLLPS DIIGYYVFDQKTGGFIVKKGPVFTNILLADEINRASPRTQSALLEAMQERQVTIEGETYRLPEPFIVIATMNPVEMEGVF PLPEAQLDRFLVKVETSYTSHVGLVKILKRSDEIEKAINELKPVVSRQEILEEINRVTSIKVDESIYDYVASIIEETRRH PAVRLGGSPRAGIALIKLARSLAYIEGRNYVIPDDVKEACKPVLLHRLILKPEYEVQGLSVERVIDDVLSSVKVPSP
Sequences:
>Translated_317_residues MHLGVLMGFYSSIKKILVDDELLIEKEKELRIIIASILAKGHMIMEGVPGVAKTYTAKAVSKLLDLEFKRVQMTPDLLPS DIIGYYVFDQKTGGFIVKKGPVFTNILLADEINRASPRTQSALLEAMQERQVTIEGETYRLPEPFIVIATMNPVEMEGVF PLPEAQLDRFLVKVETSYTSHVGLVKILKRSDEIEKAINELKPVVSRQEILEEINRVTSIKVDESIYDYVASIIEETRRH PAVRLGGSPRAGIALIKLARSLAYIEGRNYVIPDDVKEACKPVLLHRLILKPEYEVQGLSVERVIDDVLSSVKVPSP >Mature_317_residues MHLGVLMGFYSSIKKILVDDELLIEKEKELRIIIASILAKGHMIMEGVPGVAKTYTAKAVSKLLDLEFKRVQMTPDLLPS DIIGYYVFDQKTGGFIVKKGPVFTNILLADEINRASPRTQSALLEAMQERQVTIEGETYRLPEPFIVIATMNPVEMEGVF PLPEAQLDRFLVKVETSYTSHVGLVKILKRSDEIEKAINELKPVVSRQEILEEINRVTSIKVDESIYDYVASIIEETRRH PAVRLGGSPRAGIALIKLARSLAYIEGRNYVIPDDVKEACKPVLLHRLILKPEYEVQGLSVERVIDDVLSSVKVPSP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 35550; Mature: 35550
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLGVLMGFYSSIKKILVDDELLIEKEKELRIIIASILAKGHMIMEGVPGVAKTYTAKAV CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH SKLLDLEFKRVQMTPDLLPSDIIGYYVFDQKTGGFIVKKGPVFTNILLADEINRASPRTQ HHHHCCHHHHEECCCCCCCCHHHEEEEEECCCCCEEEECCCCCEEEEEHHCCCCCCCHHH SALLEAMQERQVTIEGETYRLPEPFIVIATMNPVEMEGVFPLPEAQLDRFLVKVETSYTS HHHHHHHHHCCEEECCCEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHEEEECCCHH HVGLVKILKRSDEIEKAINELKPVVSRQEILEEINRVTSIKVDESIYDYVASIIEETRRH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCC PAVRLGGSPRAGIALIKLARSLAYIEGRNYVIPDDVKEACKPVLLHRLILKPEYEVQGLS CCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VERVIDDVLSSVKVPSP HHHHHHHHHHHCCCCCC >Mature Secondary Structure MHLGVLMGFYSSIKKILVDDELLIEKEKELRIIIASILAKGHMIMEGVPGVAKTYTAKAV CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH SKLLDLEFKRVQMTPDLLPSDIIGYYVFDQKTGGFIVKKGPVFTNILLADEINRASPRTQ HHHHCCHHHHEECCCCCCCCHHHEEEEEECCCCCEEEECCCCCEEEEEHHCCCCCCCHHH SALLEAMQERQVTIEGETYRLPEPFIVIATMNPVEMEGVFPLPEAQLDRFLVKVETSYTS HHHHHHHHHCCEEECCCEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHEEEECCCHH HVGLVKILKRSDEIEKAINELKPVVSRQEILEEINRVTSIKVDESIYDYVASIIEETRRH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCC PAVRLGGSPRAGIALIKLARSLAYIEGRNYVIPDDVKEACKPVLLHRLILKPEYEVQGLS CCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VERVIDDVLSSVKVPSP HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]