| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is thiL [H]
Identifier: 218883885
GI number: 218883885
Start: 537210
End: 538232
Strand: Direct
Name: thiL [H]
Synonym: DKAM_0574
Alternate gene names: 218883885
Gene position: 537210-538232 (Clockwise)
Preceding gene: 218883884
Following gene: 218883886
Centisome position: 39.35
GC content: 47.21
Gene sequence:
>1023_bases GTGGCTTCATTGAGGGGATCCCTTGGGGAAATGGGTGAGGAAGCTGTAATAAATCTTATAGCTGATAAACTGATCAGCAA GCCTGAATCGGGCGAGAGTCTTACGTATCCCGATGATGCTAGAGATTTACTGCCAAAAGGCCCTAGGTTAATATATTCCA TGGATGCTTATAGAATAAAATCGCTTATGCTTCCATGGAGGACCTGGAGCGATATCGGGTGGATGGCTTTAACCGGTGCC CTTAGCGATGTAGTGGTTAAAGGCGGAGTGCCTAGTGTAGCAATGATTGGGTTAGGACTTAGCAGTGAAACAGATATCCT GGATTTAGAGGAGCTGGTCAAGGGGCTCCGTGAAGCGAGTAACTACTATGATGTGAGGATTACAGGGGGAGATACAAATG AAAGCCTTGATCCATGGATAGCTGTCTCAGTAATGGGGTTTACAACCTGTAAACGTCCCCCAAGTAGGCGTGGAGCCAGG CCAGGCGACATCGTTATCGCCACGGGATCTTATGGCTCGATGGGTTTTGTAGCGCTCCACGGTGTCGTGGAGGCTAGTGG AATAAGCTGGGTCGTTGATAACACTAAGAGGGTGTATTTGAAGCTCGAAGTAGCCAACGTGATCATGTCTACTTATAGAT TCATTCATGCTTCAATGGATGTAAGTGATGGACTTGGATATACCTTGGAACAACTCTCAGAGCTCAGCGGGTATGGTATA CTCCTTGAGAATCTCCCGGTACACCCAGCAGGACTTAGAGAGTATTGCAAGAACAGTATTGAATGCATGTGGAGGCATGT ACTAGTTGGAGGAGAGGAGTATGGTGCCGTGCTAATTGTCGCTGGAGAGTACCTGGATAAAGTGGCTGAGGAACTAGATT ACTATGAGATACCATATAGTATCATAGGGAGGGTGGGAAACATATCCCCGGGAATATATATTAATGGAGCCAGGATCACT GTGGAAAGATGGGATCAATTCAGGGGGTGGGGGAAACGTTTTCCAATGGGTGATGCCCGGTAA
Upstream 100 bases:
>100_bases GATGAAACCAGCTTATATAAACCTATATGAGACCTAAACCCCTTTAACATGGAGCTCTAACTAAATATTTCATGAAGAGA GATAAAAACATGTAGTCAAG
Downstream 100 bases:
>100_bases GCTAGCTCAATCACCTATGCCTAGATTAAGTGATATCCCTGCACTGACACGATACTTTACCGGGGTAGTGGCATTAATGG ATCAGCATGATGCACCGTTA
Product: AIR synthase-like protein domain-containing protein
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MASLRGSLGEMGEEAVINLIADKLISKPESGESLTYPDDARDLLPKGPRLIYSMDAYRIKSLMLPWRTWSDIGWMALTGA LSDVVVKGGVPSVAMIGLGLSSETDILDLEELVKGLREASNYYDVRITGGDTNESLDPWIAVSVMGFTTCKRPPSRRGAR PGDIVIATGSYGSMGFVALHGVVEASGISWVVDNTKRVYLKLEVANVIMSTYRFIHASMDVSDGLGYTLEQLSELSGYGI LLENLPVHPAGLREYCKNSIECMWRHVLVGGEEYGAVLIVAGEYLDKVAEELDYYEIPYSIIGRVGNISPGIYINGARIT VERWDQFRGWGKRFPMGDAR
Sequences:
>Translated_340_residues MASLRGSLGEMGEEAVINLIADKLISKPESGESLTYPDDARDLLPKGPRLIYSMDAYRIKSLMLPWRTWSDIGWMALTGA LSDVVVKGGVPSVAMIGLGLSSETDILDLEELVKGLREASNYYDVRITGGDTNESLDPWIAVSVMGFTTCKRPPSRRGAR PGDIVIATGSYGSMGFVALHGVVEASGISWVVDNTKRVYLKLEVANVIMSTYRFIHASMDVSDGLGYTLEQLSELSGYGI LLENLPVHPAGLREYCKNSIECMWRHVLVGGEEYGAVLIVAGEYLDKVAEELDYYEIPYSIIGRVGNISPGIYINGARIT VERWDQFRGWGKRFPMGDAR >Mature_339_residues ASLRGSLGEMGEEAVINLIADKLISKPESGESLTYPDDARDLLPKGPRLIYSMDAYRIKSLMLPWRTWSDIGWMALTGAL SDVVVKGGVPSVAMIGLGLSSETDILDLEELVKGLREASNYYDVRITGGDTNESLDPWIAVSVMGFTTCKRPPSRRGARP GDIVIATGSYGSMGFVALHGVVEASGISWVVDNTKRVYLKLEVANVIMSTYRFIHASMDVSDGLGYTLEQLSELSGYGIL LENLPVHPAGLREYCKNSIECMWRHVLVGGEEYGAVLIVAGEYLDKVAEELDYYEIPYSIIGRVGNISPGIYINGARITV ERWDQFRGWGKRFPMGDAR
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=270, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 37345; Mature: 37214
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLRGSLGEMGEEAVINLIADKLISKPESGESLTYPDDARDLLPKGPRLIYSMDAYRIK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHH SLMLPWRTWSDIGWMALTGALSDVVVKGGVPSVAMIGLGLSSETDILDLEELVKGLREAS HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC NYYDVRITGGDTNESLDPWIAVSVMGFTTCKRPPSRRGARPGDIVIATGSYGSMGFVALH CEEEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH GVVEASGISWVVDNTKRVYLKLEVANVIMSTYRFIHASMDVSDGLGYTLEQLSELSGYGI HHHHCCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LLENLPVHPAGLREYCKNSIECMWRHVLVGGEEYGAVLIVAGEYLDKVAEELDYYEIPYS EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCEECCHH IIGRVGNISPGIYINGARITVERWDQFRGWGKRFPMGDAR HHCCCCCCCCCEEEECCEEEHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ASLRGSLGEMGEEAVINLIADKLISKPESGESLTYPDDARDLLPKGPRLIYSMDAYRIK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHH SLMLPWRTWSDIGWMALTGALSDVVVKGGVPSVAMIGLGLSSETDILDLEELVKGLREAS HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC NYYDVRITGGDTNESLDPWIAVSVMGFTTCKRPPSRRGARPGDIVIATGSYGSMGFVALH CEEEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH GVVEASGISWVVDNTKRVYLKLEVANVIMSTYRFIHASMDVSDGLGYTLEQLSELSGYGI HHHHCCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEE LLENLPVHPAGLREYCKNSIECMWRHVLVGGEEYGAVLIVAGEYLDKVAEELDYYEIPYS EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHCCCEECCHH IIGRVGNISPGIYINGARITVERWDQFRGWGKRFPMGDAR HHCCCCCCCCCEEEECCEEEHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]