| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883819
Identifier: 218883819
GI number: 218883819
Start: 477775
End: 478512
Strand: Direct
Name: 218883819
Synonym: DKAM_0508
Alternate gene names: NA
Gene position: 477775-478512 (Clockwise)
Preceding gene: 218883818
Following gene: 218883820
Centisome position: 35.0
GC content: 42.68
Gene sequence:
>738_bases ATGATAATGCAGGGTAGTCTAGGCGATTTCCTCAATGTTTCAAAGATTGTTCAGAACGGTAAAGTAGGGGTACGTGAGCT GATAGAGTTATCCGAGATATCTCTGATAGGGATATATGATGCTGGTGAAATCGAGAAGGTAAGGGAGCTCATCGAGAATA GAATAGGATACTTTCTTCTCAACGTATACTATAGTAATAGAGTGGAATGCATGATACTGGTTAAAGGCAAGAACGGGGAG GTAACCAATGCTGAATGCTATAGCCAGGGCATGTTAGTAAGCGATCCAGGGGAGCTGGCTAGAATAATATCGGGTAAACC AGTTAGAAAAATCGGTGTCTCGGAAGTTAAACCACCGTTTATCACTCTAGAGAAGGATACTAATAGAATTGACGAATTGA CCAGGGTAAGGCTTATGGCCTACAGGGTTGTAGAGACGTACAATAGGCTTGTGGAAGCCGTATACTCGGGCACTCCATTC AGCCTCAGCTTATACTACGAGGAGATAGATAAATACGTGAAGAAGTATATCGCTGAATTCGAGGAAGCATCTAGAAAGCT CGGCGGTAGATCTAATGTAACTGTCAAGAATGGTTTACGGGAGATAGACGAGGTCATCTCACAACCAGGCAGGGAGGACA CCCCGAATATCATTGTGATATTGAGGAAGCTATTGCTAGACATATCAGCATTCACAACATTAAGTAGGATTCAGATCGAG AGGGTTGAAGTATATTAA
Upstream 100 bases:
>100_bases TGCACCTAGTTAATGAGGTAAGAACTACACGTACAAGATGTATGTATGAATCATACGTCTGGTTTAAGTAAAGAAATATA TGATCAAGTAGTTGAGGTAG
Downstream 100 bases:
>100_bases CACTACTTGTTCACCAACGCTTGATAGTGGCCACTGGTAGTGATGTGAAGGAATATTTGAGGCTTGAATACAACACGTTG AGCGCTGAATATACTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIMQGSLGDFLNVSKIVQNGKVGVRELIELSEISLIGIYDAGEIEKVRELIENRIGYFLLNVYYSNRVECMILVKGKNGE VTNAECYSQGMLVSDPGELARIISGKPVRKIGVSEVKPPFITLEKDTNRIDELTRVRLMAYRVVETYNRLVEAVYSGTPF SLSLYYEEIDKYVKKYIAEFEEASRKLGGRSNVTVKNGLREIDEVISQPGREDTPNIIVILRKLLLDISAFTTLSRIQIE RVEVY
Sequences:
>Translated_245_residues MIMQGSLGDFLNVSKIVQNGKVGVRELIELSEISLIGIYDAGEIEKVRELIENRIGYFLLNVYYSNRVECMILVKGKNGE VTNAECYSQGMLVSDPGELARIISGKPVRKIGVSEVKPPFITLEKDTNRIDELTRVRLMAYRVVETYNRLVEAVYSGTPF SLSLYYEEIDKYVKKYIAEFEEASRKLGGRSNVTVKNGLREIDEVISQPGREDTPNIIVILRKLLLDISAFTTLSRIQIE RVEVY >Mature_245_residues MIMQGSLGDFLNVSKIVQNGKVGVRELIELSEISLIGIYDAGEIEKVRELIENRIGYFLLNVYYSNRVECMILVKGKNGE VTNAECYSQGMLVSDPGELARIISGKPVRKIGVSEVKPPFITLEKDTNRIDELTRVRLMAYRVVETYNRLVEAVYSGTPF SLSLYYEEIDKYVKKYIAEFEEASRKLGGRSNVTVKNGLREIDEVISQPGREDTPNIIVILRKLLLDISAFTTLSRIQIE RVEVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27812; Mature: 27812
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMQGSLGDFLNVSKIVQNGKVGVRELIELSEISLIGIYDAGEIEKVRELIENRIGYFLL CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHEEE NVYYSNRVECMILVKGKNGEVTNAECYSQGMLVSDPGELARIISGKPVRKIGVSEVKPPF EEEECCCEEEEEEEECCCCCCCCHHHHHCCCEEECHHHHHHHHCCCCCHHCCHHHCCCCE ITLEKDTNRIDELTRVRLMAYRVVETYNRLVEAVYSGTPFSLSLYYEEIDKYVKKYIAEF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH EEASRKLGGRSNVTVKNGLREIDEVISQPGREDTPNIIVILRKLLLDISAFTTLSRIQIE HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE RVEVY EEECC >Mature Secondary Structure MIMQGSLGDFLNVSKIVQNGKVGVRELIELSEISLIGIYDAGEIEKVRELIENRIGYFLL CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHEEE NVYYSNRVECMILVKGKNGEVTNAECYSQGMLVSDPGELARIISGKPVRKIGVSEVKPPF EEEECCCEEEEEEEECCCCCCCCHHHHHCCCEEECHHHHHHHHCCCCCHHCCHHHCCCCE ITLEKDTNRIDELTRVRLMAYRVVETYNRLVEAVYSGTPFSLSLYYEEIDKYVKKYIAEF EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH EEASRKLGGRSNVTVKNGLREIDEVISQPGREDTPNIIVILRKLLLDISAFTTLSRIQIE HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE RVEVY EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA