Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883818
Identifier: 218883818
GI number: 218883818
Start: 477291
End: 477506
Strand: Direct
Name: 218883818
Synonym: DKAM_0507
Alternate gene names: NA
Gene position: 477291-477506 (Clockwise)
Preceding gene: 218883816
Following gene: 218883819
Centisome position: 34.96
GC content: 53.7
Gene sequence:
>216_bases TTGAGAGCTCTTCGAGACACCCGGGATAAGGGGGCGAGGCTGATTCGAGAAGACCACAGGATCCTCAAGAACCCGGAGCA CTGGTTCACCGGAGACAGGGATAGGGTGGCATGCATGAATCTCTTCCTTAAATCCCTTAATTCAAGATGTAGGGTGCCCG CGAACACCCCTAAGCCATATGCAAGCCCGAGAGGAATACAGGGGGAACAAGGATGA
Upstream 100 bases:
>100_bases GCCCTCATGAATTGTTTTTGTTTTTATATGTTTATAGTTGTTGATGATGGTTTATATTGTTTAATGCTATTCCTCTGGTA TTATACTACCCAGTGAGGGA
Downstream 100 bases:
>100_bases AGGGATGAAACCAATTTAAATAAACCTATATAAGACCTGCCCTTGTATCCGGGACTGTTGATACTTGAATACATCAGCTT AATTTTCAACCATTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRALRDTRDKGARLIREDHRILKNPEHWFTGDRDRVACMNLFLKSLNSRCRVPANTPKPYASPRGIQGEQG
Sequences:
>Translated_71_residues MRALRDTRDKGARLIREDHRILKNPEHWFTGDRDRVACMNLFLKSLNSRCRVPANTPKPYASPRGIQGEQG >Mature_71_residues MRALRDTRDKGARLIREDHRILKNPEHWFTGDRDRVACMNLFLKSLNSRCRVPANTPKPYASPRGIQGEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8219; Mature: 8219
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALRDTRDKGARLIREDHRILKNPEHWFTGDRDRVACMNLFLKSLNSRCRVPANTPKPY CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC ASPRGIQGEQG CCCCCCCCCCC >Mature Secondary Structure MRALRDTRDKGARLIREDHRILKNPEHWFTGDRDRVACMNLFLKSLNSRCRVPANTPKPY CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC ASPRGIQGEQG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA