Click here to switch to the map view.

The map label for this gene is flaJ [H]

Identifier: 218883820

GI number: 218883820

Start: 478533

End: 479732

Strand: Direct

Name: flaJ [H]

Synonym: DKAM_0509

Alternate gene names: 218883820

Gene position: 478533-479732 (Clockwise)

Preceding gene: 218883819

Following gene: 218883821

Centisome position: 35.05

GC content: 41.5

Gene sequence:

>1200_bases
TTGATAGTGGCCACTGGTAGTGATGTGAAGGAATATTTGAGGCTTGAATACAACACGTTGAGCGCTGAATATACTTCATC
ATATAATAGATTCATAGGTACATTAAGCGTGGTGCTAGGAGTATACACCACACTGCTTGGAGCACTAGCTTTCCTGATTG
CAGTCCTCTTATTAATGGGCATGCTTTTCGGAGGGTTATCTCAATCATTTACAAGTGGTGTCCTCGGAGTAGGTTTGTCA
CTATCAGGCATGTCACTCCTATTATTTATACTAGTGAAGAGGCCTTTATTCGAGTATAAGGAAGGGAGAAGCACGCTTGT
CAAGGTTATAAGAGTGCTTGGAGCTTCTGGAGTAGTATTTATGGCATTCATGGTTTTATACATGCTTGTAACAGGAGCCC
TCTACAGCTTAAGGAAAACAGGGATAATGCTGGTTGCGATAGGCATAGTATTATTACCAGCCGGAATATTAGTGAAGATG
CATGAGGGAGCCATTAGCGAGCTAGATCTATTCTACCCTGCATTCATTAGAAGCTATGGAGAGCATCTAGCTGTTATACC
AGATATGGTGAGCTCGCTTAAGCCGCTGCTGGCGGCCGAGCTCGGTAGACTAAGGAAAACACTGAATAAGGTTTATGCTG
GACTAGTTAACAGGGTTAACCCTAGAATCATGTGGATCAGGTTTGCTGAGGAGACATGTAGCGAGCTAATATATAGGTCT
ACAAGCATATTCATGGATACACTGGAGTTAGGCGGGGATATGGGTGAAACAGGGGCTCTTCTCTCAGAACACTTCAACAA
CATATATAGAATAAGGGCAAACTATACACAGGTGTTCAAGACATTCGAGACAACGCTTTACATGATGCATCTCATCGTAG
TGCTTCTACTAGTATTTATAAGTGGATTCGTAAGGGTATTCTCATATGTATTAACAAACTTTGTAGGCAGCGTGCCAGCC
GTGTTTGCCGATATCTTCGCATTCTTTACGGTTACACCTGAAGATGTTTCATTTATTGTTAATCTATTAACACTAGTAAT
ATTGATCTCTAATTCAGTGACGCTTTACTCAGTTAACCCAGGTTCTAGGTATGAGCTATACTATTTCCTGGCGGTATTAT
TCATGTTAACTGGTATAGGGATCTACACAGGTGATATAGCTGTTGACTACCTATTCAACACAGTGTTCTCGTCACTATAG

Upstream 100 bases:

>100_bases
TATTGAGGAAGCTATTGCTAGACATATCAGCATTCACAACATTAAGTAGGATTCAGATCGAGAGGGTTGAAGTATATTAA
CACTACTTGTTCACCAACGC

Downstream 100 bases:

>100_bases
GCATTTATAGCCTTGGAGTCCGATCAATATAGGGTATACATACCAAATACAGCCTTGGTGGCTTTGTTGAACAAGATAAT
AAAGCTTCCTCAGCCAGGTA

Product: flagellar protein J-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIVATGSDVKEYLRLEYNTLSAEYTSSYNRFIGTLSVVLGVYTTLLGALAFLIAVLLLMGMLFGGLSQSFTSGVLGVGLS
LSGMSLLLFILVKRPLFEYKEGRSTLVKVIRVLGASGVVFMAFMVLYMLVTGALYSLRKTGIMLVAIGIVLLPAGILVKM
HEGAISELDLFYPAFIRSYGEHLAVIPDMVSSLKPLLAAELGRLRKTLNKVYAGLVNRVNPRIMWIRFAEETCSELIYRS
TSIFMDTLELGGDMGETGALLSEHFNNIYRIRANYTQVFKTFETTLYMMHLIVVLLLVFISGFVRVFSYVLTNFVGSVPA
VFADIFAFFTVTPEDVSFIVNLLTLVILISNSVTLYSVNPGSRYELYYFLAVLFMLTGIGIYTGDIAVDYLFNTVFSSL

Sequences:

>Translated_399_residues
MIVATGSDVKEYLRLEYNTLSAEYTSSYNRFIGTLSVVLGVYTTLLGALAFLIAVLLLMGMLFGGLSQSFTSGVLGVGLS
LSGMSLLLFILVKRPLFEYKEGRSTLVKVIRVLGASGVVFMAFMVLYMLVTGALYSLRKTGIMLVAIGIVLLPAGILVKM
HEGAISELDLFYPAFIRSYGEHLAVIPDMVSSLKPLLAAELGRLRKTLNKVYAGLVNRVNPRIMWIRFAEETCSELIYRS
TSIFMDTLELGGDMGETGALLSEHFNNIYRIRANYTQVFKTFETTLYMMHLIVVLLLVFISGFVRVFSYVLTNFVGSVPA
VFADIFAFFTVTPEDVSFIVNLLTLVILISNSVTLYSVNPGSRYELYYFLAVLFMLTGIGIYTGDIAVDYLFNTVFSSL
>Mature_399_residues
MIVATGSDVKEYLRLEYNTLSAEYTSSYNRFIGTLSVVLGVYTTLLGALAFLIAVLLLMGMLFGGLSQSFTSGVLGVGLS
LSGMSLLLFILVKRPLFEYKEGRSTLVKVIRVLGASGVVFMAFMVLYMLVTGALYSLRKTGIMLVAIGIVLLPAGILVKM
HEGAISELDLFYPAFIRSYGEHLAVIPDMVSSLKPLLAAELGRLRKTLNKVYAGLVNRVNPRIMWIRFAEETCSELIYRS
TSIFMDTLELGGDMGETGALLSEHFNNIYRIRANYTQVFKTFETTLYMMHLIVVLLLVFISGFVRVFSYVLTNFVGSVPA
VFADIFAFFTVTPEDVSFIVNLLTLVILISNSVTLYSVNPGSRYELYYFLAVLFMLTGIGIYTGDIAVDYLFNTVFSSL

Specific function: Unknown

COG id: COG1955

COG function: function code NU; Archaeal flagella assembly protein J

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1286 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44185; Mature: 44185

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVATGSDVKEYLRLEYNTLSAEYTSSYNRFIGTLSVVLGVYTTLLGALAFLIAVLLLMG
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFGGLSQSFTSGVLGVGLSLSGMSLLLFILVKRPLFEYKEGRSTLVKVIRVLGASGVVF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
MAFMVLYMLVTGALYSLRKTGIMLVAIGIVLLPAGILVKMHEGAISELDLFYPAFIRSYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
EHLAVIPDMVSSLKPLLAAELGRLRKTLNKVYAGLVNRVNPRIMWIRFAEETCSELIYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
TSIFMDTLELGGDMGETGALLSEHFNNIYRIRANYTQVFKTFETTLYMMHLIVVLLLVFI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFVRVFSYVLTNFVGSVPAVFADIFAFFTVTPEDVSFIVNLLTLVILISNSVTLYSVNP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECC
GSRYELYYFLAVLFMLTGIGIYTGDIAVDYLFNTVFSSL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVATGSDVKEYLRLEYNTLSAEYTSSYNRFIGTLSVVLGVYTTLLGALAFLIAVLLLMG
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFGGLSQSFTSGVLGVGLSLSGMSLLLFILVKRPLFEYKEGRSTLVKVIRVLGASGVVF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH
MAFMVLYMLVTGALYSLRKTGIMLVAIGIVLLPAGILVKMHEGAISELDLFYPAFIRSYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH
EHLAVIPDMVSSLKPLLAAELGRLRKTLNKVYAGLVNRVNPRIMWIRFAEETCSELIYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
TSIFMDTLELGGDMGETGALLSEHFNNIYRIRANYTQVFKTFETTLYMMHLIVVLLLVFI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFVRVFSYVLTNFVGSVPAVFADIFAFFTVTPEDVSFIVNLLTLVILISNSVTLYSVNP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECC
GSRYELYYFLAVLFMLTGIGIYTGDIAVDYLFNTVFSSL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]