Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883812
Identifier: 218883812
GI number: 218883812
Start: 472453
End: 473292
Strand: Direct
Name: 218883812
Synonym: DKAM_0501
Alternate gene names: NA
Gene position: 472453-473292 (Clockwise)
Preceding gene: 218883811
Following gene: 218883813
Centisome position: 34.61
GC content: 45.83
Gene sequence:
>840_bases TTGACCAGTATTCGTGGAGACATCTTTTTATTCCCAGTAGTATGGGTCGCGATAAGCTCGGCAAGCATACTTGTAGTCCT CTCCAATGAACCCGGTGAGGTATGCGCGTTCTGGAGGCTATTCTTCTCCTCGCTGACCCTGCTACCGTTATGGATTCAGG CAAAGAAGCATGTGAAAATGCATCATGTAGCATCGGGGATCGCTTTATCACTGCATTTCATACTATGGATGAGAAGCCTC TTCCTGATACCCGTCTACACCAGTACATTGCTTGTCGTGGTTTACCCGCTTTACTCTCTGGTGGTAGATATACTTGTCTA TAAGTATAGGCCAAGCCTAATCCAGCTACTTGGATTCGCTGGAGGCATTACCTCTCTCACGCTTTTTCTCGGGGTTAACA GGCTAGCTTTAAGCCAGGGTGCTGTACTCTCCCTCTTAGCCGGGTTATCTGTAACACTGTATTTCGAGCTGGGCAGATAT GCCAGGGGGATTGTGAAGGAGTCTCTTGTGGAGTATGCCTTCCCAACATATATGTCTGCAACTGTTTTCACAGCATTATA TAATATTGTATCCGGTTCAAGGATACTGCCGAGCAGCCACTTATCCTATCTATACTTCATCCTGATGGCATTAATCCCCA TGATGCTCGGGCACACCTTAATGAACTATCTTCTAAAACACTATCCCGTGTATCTTGTTACATCGGTGTCTCTTGGAGAA CCGTTTGGAGCCGGGTTGCTTGCATACATGGTGCTGGGGCAGCGCATCTCATTATATAACCTGGCTACCGGCTTATTAAC AATTGTATCTCTTATAGCTATAATACGTGGTTATAGATAG
Upstream 100 bases:
>100_bases GGGTGCTGCTAACGGTAGCGGTGTTCCTGGTGCTGGCTGATCTCGCTGAGATAATGGGGTTCCATAAGTTGAAGAAACTA TAACCCTGGAGCTGAAAGCT
Downstream 100 bases:
>100_bases GGGATTACGGGAGTGGTGTGGTTGGATAGAAGGCTTACAACACTTATAAGTGTTGATGACGCGGTGGAACTACTTGCCAG GACTCTAAGCGGGGCAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKMHHVASGIALSLHFILWMRSL FLIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFAGGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRY ARGIVKESLVEYAFPTYMSATVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGE PFGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR
Sequences:
>Translated_279_residues MTSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKMHHVASGIALSLHFILWMRSL FLIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFAGGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRY ARGIVKESLVEYAFPTYMSATVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGE PFGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR >Mature_278_residues TSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKMHHVASGIALSLHFILWMRSLF LIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFAGGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRYA RGIVKESLVEYAFPTYMSATVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGEP FGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30987; Mature: 30856
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKM CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHVASGIALSLHFILWMRSLFLIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRYARGIVKESLVEYAFPTYMSA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PFGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKM CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHVASGIALSLHFILWMRSLFLIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRYARGIVKESLVEYAFPTYMSA CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGE HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PFGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA