Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is argS [H]
Identifier: 218883811
GI number: 218883811
Start: 470159
End: 472435
Strand: Direct
Name: argS [H]
Synonym: DKAM_0500
Alternate gene names: 218883811
Gene position: 470159-472435 (Clockwise)
Preceding gene: 218883810
Following gene: 218883812
Centisome position: 34.44
GC content: 45.54
Gene sequence:
>2277_bases ATGCCCAGCGCGTCAACTAGTATACAGGAGTGCATACTACGGGGATTAGTAAGAGCTGTAAAGGATTCAACCGGGATCGA GGAGGAAGTAGTTGAAAAATATATTATTGAAGGCAAGATAAGGATAGCCCCGACACCTGATCCAAGGATGGGTGATTATG GAGTAGCCTTACACATAGTGTTCAAAAACTATCCAAGGGATAAATGGGAGGAGATCGGGTCCCTGATAGCGAGGAAGCTT CTCGAGTACTCAGCTGAGGAATGCAGGCTTAGAAACACCGTGTATGTTAACGGCTATATCAACGTGGAAGTAGACTACTC CACTATATTCAAGTCGTTCATGGAGTCGCTGCTCTCGGGCAGATTGCTCTCCGAGCTAAGGAGCATCGGCTTCGGTAAAA ACATTGTTGTAGAGCATACAAGCGCTAACCCGGTTCACCCCCTGCATATTGGCAGCGGTAGAAACAGTGTAATAGGCGAC ACCTATGCTAGGCTTCTTAAATACCTCGGCTTTAACGTGGTGAGGCTCTTCTACGTTAATGACCTCGGGCGCCAGGTAGC AGTATTAGCTTACGGGGTCAGCAAGCTGAGGTCTCAGGGCATCGTGCCGAGGCCCGGCTTGAAAATAGATCACTGGTATG GCATAGTATATGCTTTAACAAACATATTCATAGAGGAAGACAGAGTAGCACATGAACTAGGCATGCTCTCACTAGAGTTG AACAAGCTACTTGAGGAACTAGAGAACACGCTACAAGGGTTAGCCGGGGAAGCGGATTCACCAGCTCTGAAAAAGTTGCA TTCAAAGATACATATCCTCGCAAGTAAGACGCGTCTAAAGCACGATACTGTTAAAATACTGGGAGAGCTAATCAAGGAGC TGAGACATCAGAGTGAAAGCTGGGAGAAGCTTCCAGACATCCTTAACGAATATAGTAGAAGGGTAGGTGAGCTGGCTACT AGGTACAGGGAGCTCTACAAGGAGTATGTGGAGTATGTAAAGGCTAAGAGCACCCTATGCAGGGACTACCATGAAATATG CAGGGGGTTACAGCAAGGGTTCAGGGGTTACGAGGATGCTGAGCGAGAGATATCGGAGATCATGAAGAGGGCTGAAGGAG GCGATCCCGAGGTAAGGCGTCTCCTCAGAGATATATCAGGGAATGTGTTAAGGGGCTTTATTGAGACCCTAGAAAAGATC AATATTGGATTCGACGGCTTCGATTATGAGTCAAGCGATGAAGTACTCGAGTTATCGAAGGGCATTGTTGACGAAGTAGT TAAGACAGCGTATACTAGGATAGTTGATGGAGCCGTAGAAGTTGATCTCAACAAGGCTGGTGAGGAAAACAAGTATGTTA GAAGCCTCTTCCATCCTGATCAACCCGGTAGATTCATTATTAGGAGGCGGGATGGGACCACTCTTTATGTTACAAGGGAT ATAGCCTATACATTAATCAAGTTTAAGAGGTATAATGCTGAGAGAGTATACAATGTCATAGCCGTGGAACAAGCTAGGGC ACAGAAACAGCTAAAGGCGATACTCTACCTACTCGGCTATAAGAGGGAAGCCGATAACCTGGTACACTTCTCATATGAAA TGGTCCACTTGAAAAATATGAGGATGAGCGGTAGGAGGGGCATATACTATACAATGGATGAGTTATTAATGGATATGGAG GATTCAATAGTGGCGAGGGGTATTGAGGGATCGAGTAGCTTTAAGCAGGAGGCTGAAGGCAAGTACATTGATTTAATGGA GACAGCTAGAATGCTAGCGGTAAACAATGTGCGTGCACTACTTCTATCAGTTGAACCAGGTAAGGTCTTATCTTTCGATC CAAGCAAAATAGGTAGTTTTGAACACGGTATAACGGTTACCTATGGATTAGTAAGGGCTCAGAGCATACTTAGGAAGCTA TGGGGGCTTGAGCCACTAGTGGAAATCAATGCAGTGAGATCCAGGAGTATTGAGATCTATACATCACTTAACACTGAAAG CATGGAGTTTAATACTGAAGAAAAGCAGATACTTGAGATGCTTGTAGGCTATCCCCGTGTGTTAAGAGAGGCTTACGAGT ACATGAGGCCAGATAAACTCCTAGAGTATGCTGTAGAGTTATCGCTGTTCTTCAATAGAATGTATGAGAAGCACAGGGTT ATAGGCGAGCCAGATGCCGTTAAGAAAGCCGTCAGGGTGCTGCTAACGGTAGCGGTGTTCCTGGTGCTGGCTGATCTCGC TGAGATAATGGGGTTCCATAAGTTGAAGAAACTATAA
Upstream 100 bases:
>100_bases AGGGACAAGGCTTTCAGTTGTAAAACCATCACTTTTACCGCCTTGATTCTCCTTTTTATTGGCTTAGACTATTCTTAGTT TACTTGAAAAGGGGTCTGTA
Downstream 100 bases:
>100_bases CCCTGGAGCTGAAAGCTTTGACCAGTATTCGTGGAGACATCTTTTTATTCCCAGTAGTATGGGTCGCGATAAGCTCGGCA AGCATACTTGTAGTCCTCTC
Product: Arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MPSASTSIQECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIVFKNYPRDKWEEIGSLIARKL LEYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSGRLLSELRSIGFGKNIVVEHTSANPVHPLHIGSGRNSVIGD TYARLLKYLGFNVVRLFYVNDLGRQVAVLAYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLEL NKLLEELENTLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSESWEKLPDILNEYSRRVGELAT RYRELYKEYVEYVKAKSTLCRDYHEICRGLQQGFRGYEDAEREISEIMKRAEGGDPEVRRLLRDISGNVLRGFIETLEKI NIGFDGFDYESSDEVLELSKGIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFIIRRRDGTTLYVTRD IAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVHFSYEMVHLKNMRMSGRRGIYYTMDELLMDME DSIVARGIEGSSSFKQEAEGKYIDLMETARMLAVNNVRALLLSVEPGKVLSFDPSKIGSFEHGITVTYGLVRAQSILRKL WGLEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLEYAVELSLFFNRMYEKHRV IGEPDAVKKAVRVLLTVAVFLVLADLAEIMGFHKLKKL
Sequences:
>Translated_758_residues MPSASTSIQECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIVFKNYPRDKWEEIGSLIARKL LEYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSGRLLSELRSIGFGKNIVVEHTSANPVHPLHIGSGRNSVIGD TYARLLKYLGFNVVRLFYVNDLGRQVAVLAYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLEL NKLLEELENTLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSESWEKLPDILNEYSRRVGELAT RYRELYKEYVEYVKAKSTLCRDYHEICRGLQQGFRGYEDAEREISEIMKRAEGGDPEVRRLLRDISGNVLRGFIETLEKI NIGFDGFDYESSDEVLELSKGIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFIIRRRDGTTLYVTRD IAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVHFSYEMVHLKNMRMSGRRGIYYTMDELLMDME DSIVARGIEGSSSFKQEAEGKYIDLMETARMLAVNNVRALLLSVEPGKVLSFDPSKIGSFEHGITVTYGLVRAQSILRKL WGLEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLEYAVELSLFFNRMYEKHRV IGEPDAVKKAVRVLLTVAVFLVLADLAEIMGFHKLKKL >Mature_757_residues PSASTSIQECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIVFKNYPRDKWEEIGSLIARKLL EYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSGRLLSELRSIGFGKNIVVEHTSANPVHPLHIGSGRNSVIGDT YARLLKYLGFNVVRLFYVNDLGRQVAVLAYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLELN KLLEELENTLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSESWEKLPDILNEYSRRVGELATR YRELYKEYVEYVKAKSTLCRDYHEICRGLQQGFRGYEDAEREISEIMKRAEGGDPEVRRLLRDISGNVLRGFIETLEKIN IGFDGFDYESSDEVLELSKGIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFIIRRRDGTTLYVTRDI AYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVHFSYEMVHLKNMRMSGRRGIYYTMDELLMDMED SIVARGIEGSSSFKQEAEGKYIDLMETARMLAVNNVRALLLSVEPGKVLSFDPSKIGSFEHGITVTYGLVRAQSILRKLW GLEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLEYAVELSLFFNRMYEKHRVI GEPDAVKKAVRVLLTVAVFLVLADLAEIMGFHKLKKL
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320548, Length=398, Percent_Identity=24.8743718592965, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321883, Length=469, Percent_Identity=25.1599147121535, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 86795; Mature: 86664
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSASTSIQECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIV CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEE FKNYPRDKWEEIGSLIARKLLEYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSG ECCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHHHHHH RLLSELRSIGFGKNIVVEHTSANPVHPLHIGSGRNSVIGDTYARLLKYLGFNVVRLFYVN HHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHH DLGRQVAVLAYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLEL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKLLEELENTLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSES HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WEKLPDILNEYSRRVGELATRYRELYKEYVEYVKAKSTLCRDYHEICRGLQQGFRGYEDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EREISEIMKRAEGGDPEVRRLLRDISGNVLRGFIETLEKINIGFDGFDYESSDEVLELSK HHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH GIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFIIRRRDGTTLYVTRD HHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHH IAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVHFSYEMVHLKNM HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH RMSGRRGIYYTMDELLMDMEDSIVARGIEGSSSFKQEAEGKYIDLMETARMLAVNNVRAL CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEHHHHHHHHHHHHCCEEE LLSVEPGKVLSFDPSKIGSFEHGITVTYGLVRAQSILRKLWGLEPLVEINAVRSRSIEIY EEECCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEE TSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLEYAVELSLFFNRMYEKHRV EECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC IGEPDAVKKAVRVLLTVAVFLVLADLAEIMGFHKLKKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSASTSIQECILRGLVRAVKDSTGIEEEVVEKYIIEGKIRIAPTPDPRMGDYGVALHIV CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEE FKNYPRDKWEEIGSLIARKLLEYSAEECRLRNTVYVNGYINVEVDYSTIFKSFMESLLSG ECCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHHHHHH RLLSELRSIGFGKNIVVEHTSANPVHPLHIGSGRNSVIGDTYARLLKYLGFNVVRLFYVN HHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHH DLGRQVAVLAYGVSKLRSQGIVPRPGLKIDHWYGIVYALTNIFIEEDRVAHELGMLSLEL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKLLEELENTLQGLAGEADSPALKKLHSKIHILASKTRLKHDTVKILGELIKELRHQSES HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WEKLPDILNEYSRRVGELATRYRELYKEYVEYVKAKSTLCRDYHEICRGLQQGFRGYEDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EREISEIMKRAEGGDPEVRRLLRDISGNVLRGFIETLEKINIGFDGFDYESSDEVLELSK HHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH GIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRSLFHPDQPGRFIIRRRDGTTLYVTRD HHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEHH IAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKREADNLVHFSYEMVHLKNM HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH RMSGRRGIYYTMDELLMDMEDSIVARGIEGSSSFKQEAEGKYIDLMETARMLAVNNVRAL CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEHHHHHHHHHHHHCCEEE LLSVEPGKVLSFDPSKIGSFEHGITVTYGLVRAQSILRKLWGLEPLVEINAVRSRSIEIY EEECCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEE TSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKLLEYAVELSLFFNRMYEKHRV EECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC IGEPDAVKKAVRVLLTVAVFLVLADLAEIMGFHKLKKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11427726 [H]