Click here to switch to the map view.

The map label for this gene is 218883743

Identifier: 218883743

GI number: 218883743

Start: 401520

End: 401765

Strand: Direct

Name: 218883743

Synonym: DKAM_0432

Alternate gene names: NA

Gene position: 401520-401765 (Clockwise)

Preceding gene: 218883742

Following gene: 218883744

Centisome position: 29.41

GC content: 43.09

Gene sequence:

>246_bases
ATGAGTTCTCCCAGGTTTCACCAATATGAGATACCTTTTATAGAGCAGGAACTCCTCAAGGAGGGCTTCAGGGTGGATGA
CATATTAAAACTATGCGATCTCCACGTTGAGTTATTCAGAGAGGTATTAGCTAGTAGGGAGTTGAAGGATGTTCCGAGAG
GCCATCCACTGGATCTATTAATCCTAGAAAACCAGGAAATACTGAAGTGGAGTGAGGCACTAGGATTATATGCATCACTC
TTGTAG

Upstream 100 bases:

>100_bases
AACATGTATGGCATCAAAACCAAGTAAGAGATAGTGAAAAACCTGATAAAGCAGCTCCATCAGGGAGTTGATGTAAAGGA
GTTAAAGGAGAAATATAGGT

Downstream 100 bases:

>100_bases
CACTCCACTATCCAGCTATAGTGCAAGCACTAAAACCTAATAAACACTCCATTCCCGCCATAAAGGACAAGGACGAGGCT
TTCGGTTGTAAAAGCCACGA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Sensory Box Protein

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSSPRFHQYEIPFIEQELLKEGFRVDDILKLCDLHVELFREVLASRELKDVPRGHPLDLLILENQEILKWSEALGLYASL
L

Sequences:

>Translated_81_residues
MSSPRFHQYEIPFIEQELLKEGFRVDDILKLCDLHVELFREVLASRELKDVPRGHPLDLLILENQEILKWSEALGLYASL
L
>Mature_80_residues
SSPRFHQYEIPFIEQELLKEGFRVDDILKLCDLHVELFREVLASRELKDVPRGHPLDLLILENQEILKWSEALGLYASLL

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9518; Mature: 9387

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPRFHQYEIPFIEQELLKEGFRVDDILKLCDLHVELFREVLASRELKDVPRGHPLDLL
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
ILENQEILKWSEALGLYASLL
EECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSPRFHQYEIPFIEQELLKEGFRVDDILKLCDLHVELFREVLASRELKDVPRGHPLDLL
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
ILENQEILKWSEALGLYASLL
EECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA