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The map label for this gene is xdhB [H]

Identifier: 218883688

GI number: 218883688

Start: 349801

End: 350577

Strand: Reverse

Name: xdhB [H]

Synonym: DKAM_0377

Alternate gene names: 218883688

Gene position: 350577-349801 (Counterclockwise)

Preceding gene: 218883692

Following gene: 218883687

Centisome position: 25.68

GC content: 46.46

Gene sequence:

>777_bases
TTGATAAGAGACCGGAAAATACCTGTGCCAAAATACCTAGTGGATCTCTCTCCACTGAGGAGGGATCTCTCCTATGTAGT
AGTGGAGAATGGCGTGGTGAGAATAGGAGCTCTCACAACACTATGGGAGCTCAGTAAGAGTATACTGCACCAGGATATAA
AATATGCCGGGTTCATAGATGTCTTCAGAAAATTCGGTACCATGGCAATAAGGTTTAACGCCACGATAGGCGGTAATATC
GCGTCGGCCACACAGTACAGTGATTACATAACACTCCTGCTCGTCTACGATGCCGAGCTAAGGCTTGAAAGCGTGCATGG
TGTGAGAAAGGTCAGGCTGGAGGAATTCCTGGTCGATAAAAGGAAAACGATTCTCATGCCGAACGAGATCATCACGGAGA
TATCATTCAAGGAGCCGCCATCTAAGACAAGTAGTGCATTCATAAAGTTTGATAGAAGAGAGCTACTTATAGCCGGCATA
GTCACTGGCGCCGTCTATTTAACAGAGGAGGAAGGACGGATAAGGGAAGCCAGAATAGCCTTCGACATGATTAGTGAGCA
TAGGATACCTGGAAGGGCCAGGAGCACTGAGAAATGTATAACTGGGAGAAATATAAGCGAGGAAACCCTCATAGAGGCGG
AACAATGCCTCGATAAGGAGATGAAGAGGATTAGTGACTGGTGGGCTACCAGTGAATACAGGCTTGAAATGTCTAAGGCT
ATTTTAAGGAAGGGTCTGCGCCTCGTACACAATAGAATCCTAAACGGGGTGATGTAG

Upstream 100 bases:

>100_bases
CGATATCCATCGTCCACGGGACCTTAGCGACGCCCTGCAATTCCTTGACAAATACTCGCCAGACGCGAAGCCCCTGGCAG
GTGGTACAGAACTACTAGTA

Downstream 100 bases:

>100_bases
GTTGGCGGGGATCGTTAAAGTCAGGTTAGAGGTTAATGGTAGGGAGTACATAGTTGATGTACCTCCTCATGAGAGGTTAA
TTGACACACTAAGGTATAGA

Product: aldehyde oxidase and xanthine dehydrogenase family protein, middle subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MIRDRKIPVPKYLVDLSPLRRDLSYVVVENGVVRIGALTTLWELSKSILHQDIKYAGFIDVFRKFGTMAIRFNATIGGNI
ASATQYSDYITLLLVYDAELRLESVHGVRKVRLEEFLVDKRKTILMPNEIITEISFKEPPSKTSSAFIKFDRRELLIAGI
VTGAVYLTEEEGRIREARIAFDMISEHRIPGRARSTEKCITGRNISEETLIEAEQCLDKEMKRISDWWATSEYRLEMSKA
ILRKGLRLVHNRILNGVM

Sequences:

>Translated_258_residues
MIRDRKIPVPKYLVDLSPLRRDLSYVVVENGVVRIGALTTLWELSKSILHQDIKYAGFIDVFRKFGTMAIRFNATIGGNI
ASATQYSDYITLLLVYDAELRLESVHGVRKVRLEEFLVDKRKTILMPNEIITEISFKEPPSKTSSAFIKFDRRELLIAGI
VTGAVYLTEEEGRIREARIAFDMISEHRIPGRARSTEKCITGRNISEETLIEAEQCLDKEMKRISDWWATSEYRLEMSKA
ILRKGLRLVHNRILNGVM
>Mature_258_residues
MIRDRKIPVPKYLVDLSPLRRDLSYVVVENGVVRIGALTTLWELSKSILHQDIKYAGFIDVFRKFGTMAIRFNATIGGNI
ASATQYSDYITLLLVYDAELRLESVHGVRKVRLEEFLVDKRKTILMPNEIITEISFKEPPSKTSSAFIKFDRRELLIAGI
VTGAVYLTEEEGRIREARIAFDMISEHRIPGRARSTEKCITGRNISEETLIEAEQCLDKEMKRISDWWATSEYRLEMSKA
ILRKGLRLVHNRILNGVM

Specific function: Presumed to be a dehydrogenase, but possibly an oxidase. Participates in limited purine salvage (requires aspartate) but does not support aerobic growth on purines as the sole carbon source (purine catabolism) [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=235, Percent_Identity=25.9574468085106, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 29665; Mature: 29665

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDRKIPVPKYLVDLSPLRRDLSYVVVENGVVRIGALTTLWELSKSILHQDIKYAGFID
CCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VFRKFGTMAIRFNATIGGNIASATQYSDYITLLLVYDAELRLESVHGVRKVRLEEFLVDK
HHHHHCCEEEEEECEECCCCCCHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
RKTILMPNEIITEISFKEPPSKTSSAFIKFDRRELLIAGIVTGAVYLTEEEGRIREARIA
CCEEECCHHHHHHCCCCCCCCCCCHHHEEECCHHHHHHHHHHCEEEEECCCCCHHHHHHH
FDMISEHRIPGRARSTEKCITGRNISEETLIEAEQCLDKEMKRISDWWATSEYRLEMSKA
HHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILRKGLRLVHNRILNGVM
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRDRKIPVPKYLVDLSPLRRDLSYVVVENGVVRIGALTTLWELSKSILHQDIKYAGFID
CCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VFRKFGTMAIRFNATIGGNIASATQYSDYITLLLVYDAELRLESVHGVRKVRLEEFLVDK
HHHHHCCEEEEEECEECCCCCCHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
RKTILMPNEIITEISFKEPPSKTSSAFIKFDRRELLIAGIVTGAVYLTEEEGRIREARIA
CCEEECCHHHHHHCCCCCCCCCCCHHHEEECCHHHHHHHHHHCEEEEECCCCCHHHHHHH
FDMISEHRIPGRARSTEKCITGRNISEETLIEAEQCLDKEMKRISDWWATSEYRLEMSKA
HHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILRKGLRLVHNRILNGVM
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]