| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883692
Identifier: 218883692
GI number: 218883692
Start: 354069
End: 354815
Strand: Reverse
Name: 218883692
Synonym: DKAM_0381
Alternate gene names: NA
Gene position: 354815-354069 (Counterclockwise)
Preceding gene: 218883693
Following gene: 218883688
Centisome position: 25.99
GC content: 43.37
Gene sequence:
>747_bases ATGAGGCAACCACATAAGAAAAGAATCCAGGTAGCAGTATCGATACTAAGCGAGGTGGCAAAGAGAGTTAACGAGTTTGA TAGAGGGGCACTTGTTGATTACTTGAGGAAGACGTATGAAAAAACTGGATTAAGCCCGATCAGAGGGAAGGCTCTGCCCC CCGACATATACGACAAGGAGCTTACAACACTATATGTAATCGGTAAATATGGATTGGGGCTTGCCCAGGATTACCCATAT ATGTTCTCGAAGATTTTCTATGTAGAGGAAAACCTGGATATGGCGCTGGATCTAATACTCCAAGGCGATATCGAGGGAGC TAGAGAGAAAATAAAATCGGTGTCCCCTACAGGCGTGGTCGATGGTAACATGATTGCAAGACTGTTGAGAATACCTCTAA CAAAATTCATACTTGGATTCATGAGCGAGGATGGATTCACGAAGATACTGCATGCAGTATATAATGCTTTCCCGGAGGAG GAAAAAACCGTTAAAAGCTATGTTAAATTCTTCATAGGTTTAAAACTAGCCGAGGCAATATACAGGGGTGAGATAAGATC CCGCGAGTACAAGGAGGCATTTAAGAGGGCTCTCGCAATCAGGATTGGCTTTCCTAAAACCACGCCAAGCGATGAATATG TTAAAGCTATAGCCGAAGCCGTCTTCAACATATCCAAGAAAGAATTAGGCAGGGTACTCAGAGTTGAGGAAGAAGAGAGA GGTACGGGGGAGAAAGAAGATAAATAA
Upstream 100 bases:
>100_bases TGTAGTAGAATACGGGTTTACACGGGTAGGACAGGCTTAGACTTGAGGATCAAGCGGTTTCTACTTAGAGAGCTCCCATG TATACAGGGTGATACGCGTA
Downstream 100 bases:
>100_bases TCACGCGCGATCTTTAACCAGTCCAGTATTGTAGACTATTCACACCTCACTGAAACCGGTTCTACATGTCACCTTCTGCC TCTTGCACTCGGTCTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRQPHKKRIQVAVSILSEVAKRVNEFDRGALVDYLRKTYEKTGLSPIRGKALPPDIYDKELTTLYVIGKYGLGLAQDYPY MFSKIFYVEENLDMALDLILQGDIEGAREKIKSVSPTGVVDGNMIARLLRIPLTKFILGFMSEDGFTKILHAVYNAFPEE EKTVKSYVKFFIGLKLAEAIYRGEIRSREYKEAFKRALAIRIGFPKTTPSDEYVKAIAEAVFNISKKELGRVLRVEEEER GTGEKEDK
Sequences:
>Translated_248_residues MRQPHKKRIQVAVSILSEVAKRVNEFDRGALVDYLRKTYEKTGLSPIRGKALPPDIYDKELTTLYVIGKYGLGLAQDYPY MFSKIFYVEENLDMALDLILQGDIEGAREKIKSVSPTGVVDGNMIARLLRIPLTKFILGFMSEDGFTKILHAVYNAFPEE EKTVKSYVKFFIGLKLAEAIYRGEIRSREYKEAFKRALAIRIGFPKTTPSDEYVKAIAEAVFNISKKELGRVLRVEEEER GTGEKEDK >Mature_248_residues MRQPHKKRIQVAVSILSEVAKRVNEFDRGALVDYLRKTYEKTGLSPIRGKALPPDIYDKELTTLYVIGKYGLGLAQDYPY MFSKIFYVEENLDMALDLILQGDIEGAREKIKSVSPTGVVDGNMIARLLRIPLTKFILGFMSEDGFTKILHAVYNAFPEE EKTVKSYVKFFIGLKLAEAIYRGEIRSREYKEAFKRALAIRIGFPKTTPSDEYVKAIAEAVFNISKKELGRVLRVEEEER GTGEKEDK
Specific function: Unknown
COG id: COG4879
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28286; Mature: 28286
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPHKKRIQVAVSILSEVAKRVNEFDRGALVDYLRKTYEKTGLSPIRGKALPPDIYDKE CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LTTLYVIGKYGLGLAQDYPYMFSKIFYVEENLDMALDLILQGDIEGAREKIKSVSPTGVV HHHEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC DGNMIARLLRIPLTKFILGFMSEDGFTKILHAVYNAFPEEEKTVKSYVKFFIGLKLAEAI CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YRGEIRSREYKEAFKRALAIRIGFPKTTPSDEYVKAIAEAVFNISKKELGRVLRVEEEER HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHC GTGEKEDK CCCCCCCC >Mature Secondary Structure MRQPHKKRIQVAVSILSEVAKRVNEFDRGALVDYLRKTYEKTGLSPIRGKALPPDIYDKE CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LTTLYVIGKYGLGLAQDYPYMFSKIFYVEENLDMALDLILQGDIEGAREKIKSVSPTGVV HHHEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC DGNMIARLLRIPLTKFILGFMSEDGFTKILHAVYNAFPEEEKTVKSYVKFFIGLKLAEAI CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YRGEIRSREYKEAFKRALAIRIGFPKTTPSDEYVKAIAEAVFNISKKELGRVLRVEEEER HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHC GTGEKEDK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA