| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is apgM [H]
Identifier: 218883649
GI number: 218883649
Start: 310648
End: 311931
Strand: Reverse
Name: apgM [H]
Synonym: DKAM_0338
Alternate gene names: 218883649
Gene position: 311931-310648 (Counterclockwise)
Preceding gene: 218883652
Following gene: 218883648
Centisome position: 22.85
GC content: 48.91
Gene sequence:
>1284_bases GTGATCTCCGTGAAATATAAGCTACTCTACTTAGTGCTCGACGGCATGAGCGATAGATTAAGTGATCCAACTACTACATT AGAGAACAGTGTGAAACCAGGCTTGGACTGGATAGCCAGGAATAGTAAGTGTGGATTAATGTACACGGTTGGCAAGGGCA TCGCACCTGAGAGCGATGAGGCAGTCATCTCTATACTTGGATACGATCCTCATGAGGTTTACACTGGTAGGGGTCCTCTA GAGGCTCTCGGGGCTGGTTTAAGCATTAACGAGGAACACGAAGTCGCGTTCAGGGCTAACTTTGCAACTATAGATCCATC CACCTACACGATCATTGATAGAAGAGTCGGCAGGGACCTCACAACCAGTGAGGCACGTGAACTGGCTAAAGCAGTTGATG GATTAGAGCTGGGAATATACGATGGATATGCTAGAGTAGTAGCCACTATAGGGCATAGGGCAGTAGTTGTCATAGGTAGC AGGAGTCACAGGCTCTCACCAATGGTGGATAATAATGATCCGGCTTACAGGAGACACGGTATGGTTAGCGTGGCCGTGCC CTCCCCATCGAAGCGGGTGCCGGAGATAAAGCCCCTTGAGGATACCCCGGAGGCAAGGGTAACGGCTGAGTTAGCCAACG TATTCTTTAAGAAGGCTGTTGAAATACTCTCGAAGCACCCGGTCAACATCGAGAGGATTAGCAAAGGGCGTCTACCGGGC AACGCTATACTCATGAGGGATGCTGGTAGCAGAGTGCCGAGGGCGGTTAAGCTGCCCGAGAAATACGGGTGTAGGTTTGC AGTGTTAGCCGAGATGCCTGTGGAGATCGGTATAGGTAGGGCTTTCGGTGCTGAAACCATAATCATGGAGCCTCCGACGG GGGACCCGGCTAGAGACTACAGGGTAAGGCTGAAAGCTGCTCTAGATGCTCTTAGAGAAAACAATATAGTCTACGTGCAC TTGAAGGGACCTGATGAGCCTGGGCATGATGGCGACTTGGAGTTAAAGAAGAAGAGGATTGAGGAGATAGATAAGTATTT TATACAACCACTCATCAATGAGATAAGGGATAGATATGCATTAATTGTTACAGCTGATCACGCTACACCACCAAGCGTTA AATCACATACAGATGATCCTGTACCAGTTGCATTCTACATGCCCGGTATTAAGCCCGATAACGTGGAGAAGTTTACAGAG AGGGAGTGTAGTAAAGGAAGCTTAGGGCTCATCCAGCATGGGTGGATGCTCCTGCCTAGAGTAATCACGGAATTCCTCTC ATAG
Upstream 100 bases:
>100_bases TTGCTGGAATGGTTCAACCCGGCCACCACTATATCTAATTGAACCAACAGTATTTAATTAAGTAAGCTATTAATTTAGAG TAATTGTAAGTATTCACTGG
Downstream 100 bases:
>100_bases GAGTCCGGGTGTGTTTTTTGAAGATCAAGATACCCCTCCATGTCTCAGGCTTATGGATCCCCTCTATCTCGTCAAGTTAT CTTGAGACAGGTAGCTATGG
Product: phosphonopyruvate decarboxylase-like protein
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MISVKYKLLYLVLDGMSDRLSDPTTTLENSVKPGLDWIARNSKCGLMYTVGKGIAPESDEAVISILGYDPHEVYTGRGPL EALGAGLSINEEHEVAFRANFATIDPSTYTIIDRRVGRDLTTSEARELAKAVDGLELGIYDGYARVVATIGHRAVVVIGS RSHRLSPMVDNNDPAYRRHGMVSVAVPSPSKRVPEIKPLEDTPEARVTAELANVFFKKAVEILSKHPVNIERISKGRLPG NAILMRDAGSRVPRAVKLPEKYGCRFAVLAEMPVEIGIGRAFGAETIIMEPPTGDPARDYRVRLKAALDALRENNIVYVH LKGPDEPGHDGDLELKKKRIEEIDKYFIQPLINEIRDRYALIVTADHATPPSVKSHTDDPVPVAFYMPGIKPDNVEKFTE RECSKGSLGLIQHGWMLLPRVITEFLS
Sequences:
>Translated_427_residues MISVKYKLLYLVLDGMSDRLSDPTTTLENSVKPGLDWIARNSKCGLMYTVGKGIAPESDEAVISILGYDPHEVYTGRGPL EALGAGLSINEEHEVAFRANFATIDPSTYTIIDRRVGRDLTTSEARELAKAVDGLELGIYDGYARVVATIGHRAVVVIGS RSHRLSPMVDNNDPAYRRHGMVSVAVPSPSKRVPEIKPLEDTPEARVTAELANVFFKKAVEILSKHPVNIERISKGRLPG NAILMRDAGSRVPRAVKLPEKYGCRFAVLAEMPVEIGIGRAFGAETIIMEPPTGDPARDYRVRLKAALDALRENNIVYVH LKGPDEPGHDGDLELKKKRIEEIDKYFIQPLINEIRDRYALIVTADHATPPSVKSHTDDPVPVAFYMPGIKPDNVEKFTE RECSKGSLGLIQHGWMLLPRVITEFLS >Mature_427_residues MISVKYKLLYLVLDGMSDRLSDPTTTLENSVKPGLDWIARNSKCGLMYTVGKGIAPESDEAVISILGYDPHEVYTGRGPL EALGAGLSINEEHEVAFRANFATIDPSTYTIIDRRVGRDLTTSEARELAKAVDGLELGIYDGYARVVATIGHRAVVVIGS RSHRLSPMVDNNDPAYRRHGMVSVAVPSPSKRVPEIKPLEDTPEARVTAELANVFFKKAVEILSKHPVNIERISKGRLPG NAILMRDAGSRVPRAVKLPEKYGCRFAVLAEMPVEIGIGRAFGAETIIMEPPTGDPARDYRVRLKAALDALRENNIVYVH LKGPDEPGHDGDLELKKKRIEEIDKYFIQPLINEIRDRYALIVTADHATPPSVKSHTDDPVPVAFYMPGIKPDNVEKFTE RECSKGSLGLIQHGWMLLPRVITEFLS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 47193; Mature: 47193
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVKYKLLYLVLDGMSDRLSDPTTTLENSVKPGLDWIARNSKCGLMYTVGKGIAPESDE CCEEEEEEEEEEECCCHHHCCCCHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCC AVISILGYDPHEVYTGRGPLEALGAGLSINEEHEVAFRANFATIDPSTYTIIDRRVGRDL EEEEEECCCHHHEECCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEHHHCCCC TTSEARELAKAVDGLELGIYDGYARVVATIGHRAVVVIGSRSHRLSPMVDNNDPAYRRHG CHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHCC MVSVAVPSPSKRVPEIKPLEDTPEARVTAELANVFFKKAVEILSKHPVNIERISKGRLPG EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC NAILMRDAGSRVPRAVKLPEKYGCRFAVLAEMPVEIGIGRAFGAETIIMEPPTGDPARDY CEEEEECCCCCCCCEEECCHHHCCCEEEEECCCCEEECCCCCCCCEEEECCCCCCCCHHH RVRLKAALDALRENNIVYVHLKGPDEPGHDGDLELKKKRIEEIDKYFIQPLINEIRDRYA HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE LIVTADHATPPSVKSHTDDPVPVAFYMPGIKPDNVEKFTERECSKGSLGLIQHGWMLLPR EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VITEFLS HHHHHCC >Mature Secondary Structure MISVKYKLLYLVLDGMSDRLSDPTTTLENSVKPGLDWIARNSKCGLMYTVGKGIAPESDE CCEEEEEEEEEEECCCHHHCCCCHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCC AVISILGYDPHEVYTGRGPLEALGAGLSINEEHEVAFRANFATIDPSTYTIIDRRVGRDL EEEEEECCCHHHEECCCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEHHHCCCC TTSEARELAKAVDGLELGIYDGYARVVATIGHRAVVVIGSRSHRLSPMVDNNDPAYRRHG CHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHCC MVSVAVPSPSKRVPEIKPLEDTPEARVTAELANVFFKKAVEILSKHPVNIERISKGRLPG EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC NAILMRDAGSRVPRAVKLPEKYGCRFAVLAEMPVEIGIGRAFGAETIIMEPPTGDPARDY CEEEEECCCCCCCCEEECCHHHCCCEEEEECCCCEEECCCCCCCCEEEECCCCCCCCHHH RVRLKAALDALRENNIVYVHLKGPDEPGHDGDLELKKKRIEEIDKYFIQPLINEIRDRYA HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEE LIVTADHATPPSVKSHTDDPVPVAFYMPGIKPDNVEKFTERECSKGSLGLIQHGWMLLPR EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VITEFLS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]