Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883647

Identifier: 218883647

GI number: 218883647

Start: 309025

End: 309804

Strand: Reverse

Name: 218883647

Synonym: DKAM_0336

Alternate gene names: NA

Gene position: 309804-309025 (Counterclockwise)

Preceding gene: 218883648

Following gene: 218883646

Centisome position: 22.69

GC content: 49.1

Gene sequence:

>780_bases
TTGAGCATCCCGGCTAACCATCCACGTAGGGAAAGTCTACTCATAAGGGAGAAACTAGTCGAAGGATATAGGAGGAATAT
TGTCGCGTTAGAAGGGTTGATAGCTCATGGAAGAGGTGAGTGCTTCGATTACTTACTCGGTGAGAAAACACATGGATTCG
CTTTAAAAGCGATTAGAGCAGCCGTTGCACACTTACTCCTGGCCAAGCACCCCGTGATATCAGTCAACGGCAATACAGCG
GCCCTGGTTCCACATGAAATAGTGGAGTTAGCCGAGGTCACTGGGGCAAAGCTCGAGGTAAACCTCTTCTACAGAACCCG
TGAAAGAGAGGAAGCCATCGCCAAACACCTCATGGAGCACGGGGCACGTGAGGTATTGGGGGTCGGGGACGATGCATCAG
CCACCATACCGGAGCTATTTAGCGAGAGAAGACGCGTCAGCCCTAGAGGCATATTGATCGCCGACGTGGTATTCGTCCCC
TTGGAGGACGGGGATAGAACCGAGGCATTGAGGAAGATGGGTAAAACAGTTATAGCAGTGGACCTGAACCCTCTTTCCAG
GACAGCCCGTATGGCATCTGTCACAATAGTTGACAATATTGTTAGGGCAGTACCATTAATGATTAAGGAGGCTATACAAC
TGAAATCAATGAGCAGGGATAAGCTGGAGGAGATAGTTAGGAACTATGATAATAATAGGGTACTCCAAGAGGCATTGGAG
ACCATACTGGGGAGACTCAGAGAGCTATCCTCTTCCCAACTAATTCTACGGCCATATTGA

Upstream 100 bases:

>100_bases
ATCTGGGTTGAAAAAGAGTATGCCAGCGAGATACACGAGTTATTAAGTAGCAACGGGATAAAGGCATTTGAGACAACGAT
ATCTGATAGAGGTGTAATGG

Downstream 100 bases:

>100_bases
TGATGCATCCAAGCAATGATATCTGTGAAGAAAATACCTGGTATATGAAGCGGTTCATATAACAATAAATATAGCAGGCC
CGGATAGAATCTAGTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTA
ALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVP
LEDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE
TILGRLRELSSSQLILRPY

Sequences:

>Translated_259_residues
MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTA
ALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVP
LEDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE
TILGRLRELSSSQLILRPY
>Mature_258_residues
SIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRAAVAHLLLAKHPVISVNGNTAA
LVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEHGAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPL
EDGDRTEALRKMGKTVIAVDLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALET
ILGRLRELSSSQLILRPY

Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]

COG id: COG1701

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal pantothenate synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002855
- ProDom:   PD016827 [H]

Pfam domain/function: PF02006 DUF137 [H]

EC number: NA

Molecular weight: Translated: 28915; Mature: 28784

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH
AVAHLLLAKHPVISVNGNTAALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEH
HHHHHHHHCCCEEEECCCEEEECHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHC
GAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPLEDGDRTEALRKMGKTVIAV
CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEEE
DLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
TILGRLRELSSSQLILRPY
HHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
SIPANHPRRESLLIREKLVEGYRRNIVALEGLIAHGRGECFDYLLGEKTHGFALKAIRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH
AVAHLLLAKHPVISVNGNTAALVPHEIVELAEVTGAKLEVNLFYRTREREEAIAKHLMEH
HHHHHHHHCCCEEEECCCEEEECHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHC
GAREVLGVGDDASATIPELFSERRRVSPRGILIADVVFVPLEDGDRTEALRKMGKTVIAV
CHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEEE
DLNPLSRTARMASVTIVDNIVRAVPLMIKEAIQLKSMSRDKLEEIVRNYDNNRVLQEALE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH
TILGRLRELSSSQLILRPY
HHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]