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The map label for this gene is 218883589

Identifier: 218883589

GI number: 218883589

Start: 257221

End: 257988

Strand: Reverse

Name: 218883589

Synonym: DKAM_0278

Alternate gene names: NA

Gene position: 257988-257221 (Counterclockwise)

Preceding gene: 218883590

Following gene: 218883588

Centisome position: 18.9

GC content: 44.79

Gene sequence:

>768_bases
ATGGTCTCTATAATAGTGTTCACTGGTCCTGCAGGCTCTGGTAAGACAAGCCTGGTTAAAGCGTATAGCGAATGGGTTAG
AAGAACACTCCTATTAAGGACGGCTGTGGTTAACCTGGATCCAGGTGTCGAGGAGCCTGGTTACAAGCCGGTGCTGGATA
TAAGGGATTTCTTCACACTCAGGGATGTAATGATTAAATATGGTTTAGGCCCCAACGGCGCATTCATTAAGTCATCTGAG
CTGATAGCTGATTACATGGAGGATATACTTGGCAGGCCACCGTTCTCTAATATTGAGAAATGGGATCTAGTAGTGGTTGA
TACACCGGGACAGATGGAGGCATTCATATTTAGGCCTGCTAGCAGTGTTTTCCTTAGAAGGGTATCCAGGCTAGGTAACA
CTGTACTAGTCTACTTAATCGACTCATCCTCAATAGAGAGCGTTACAGATGCCGTCACCTTGTGGTTTATATATGTACTG
TTACAGGTTAAAACAGGACTGCCAACTATTCCGGTTATAAGTAAATCAGATATGGCCAGGAATCGTGAAATAGTGAAATT
ATTGATTGAGAGGCCAACGGATTTATTAGGCATGATCAGGGATGACACGGGATTCGCTGGGGACATAATCCCTGATCTAC
TAAGCATAGCGTTGAAGACCATGGGGCCCCTAAGGGCTGTGGAGGTCTCAGCTTTGAATAAAGAGGGCATGGATAAATTA
CATGCATTACTCCATGAAGTGTTCTGTGCCTGCGGAGATCTCACTTAA

Upstream 100 bases:

>100_bases
TGAAATGTATAATCAGCAGTTAAAGAAGATAGCTGGAGAGAGTAAGCCGGTTGAGGAAGCCTAGCCACTCCATTGTACTT
AGCGGGGGCAGGGTGCCTTA

Downstream 100 bases:

>100_bases
GGATTTATTTTTATATCTGGATATTATCAAATGCCCGATAATTCACGACGGCTAGGGTTAAAGGTGGGTGTCATGCATAT
GGGTCAACCAGTGGAAATGG

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVSIIVFTGPAGSGKTSLVKAYSEWVRRTLLLRTAVVNLDPGVEEPGYKPVLDIRDFFTLRDVMIKYGLGPNGAFIKSSE
LIADYMEDILGRPPFSNIEKWDLVVVDTPGQMEAFIFRPASSVFLRRVSRLGNTVLVYLIDSSSIESVTDAVTLWFIYVL
LQVKTGLPTIPVISKSDMARNREIVKLLIERPTDLLGMIRDDTGFAGDIIPDLLSIALKTMGPLRAVEVSALNKEGMDKL
HALLHEVFCACGDLT

Sequences:

>Translated_255_residues
MVSIIVFTGPAGSGKTSLVKAYSEWVRRTLLLRTAVVNLDPGVEEPGYKPVLDIRDFFTLRDVMIKYGLGPNGAFIKSSE
LIADYMEDILGRPPFSNIEKWDLVVVDTPGQMEAFIFRPASSVFLRRVSRLGNTVLVYLIDSSSIESVTDAVTLWFIYVL
LQVKTGLPTIPVISKSDMARNREIVKLLIERPTDLLGMIRDDTGFAGDIIPDLLSIALKTMGPLRAVEVSALNKEGMDKL
HALLHEVFCACGDLT
>Mature_255_residues
MVSIIVFTGPAGSGKTSLVKAYSEWVRRTLLLRTAVVNLDPGVEEPGYKPVLDIRDFFTLRDVMIKYGLGPNGAFIKSSE
LIADYMEDILGRPPFSNIEKWDLVVVDTPGQMEAFIFRPASSVFLRRVSRLGNTVLVYLIDSSSIESVTDAVTLWFIYVL
LQVKTGLPTIPVISKSDMARNREIVKLLIERPTDLLGMIRDDTGFAGDIIPDLLSIALKTMGPLRAVEVSALNKEGMDKL
HALLHEVFCACGDLT

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223005897, Length=241, Percent_Identity=31.1203319502075, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI223005899, Length=209, Percent_Identity=30.622009569378, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI256818742, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17552462, Length=250, Percent_Identity=28.8, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17556506, Length=194, Percent_Identity=28.8659793814433, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322532, Length=250, Percent_Identity=27.2, Blast_Score=89, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6323272, Length=187, Percent_Identity=30.4812834224599, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324836, Length=178, Percent_Identity=26.9662921348315, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45550609, Length=177, Percent_Identity=32.2033898305085, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI18543199, Length=177, Percent_Identity=30.5084745762712, Blast_Score=81, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28176; Mature: 28176

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIIVFTGPAGSGKTSLVKAYSEWVRRTLLLRTAVVNLDPGVEEPGYKPVLDIRDFFTL
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
RDVMIKYGLGPNGAFIKSSELIADYMEDILGRPPFSNIEKWDLVVVDTPGQMEAFIFRPA
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCH
SSVFLRRVSRLGNTVLVYLIDSSSIESVTDAVTLWFIYVLLQVKTGLPTIPVISKSDMAR
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
NREIVKLLIERPTDLLGMIRDDTGFAGDIIPDLLSIALKTMGPLRAVEVSALNKEGMDKL
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
HALLHEVFCACGDLT
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSIIVFTGPAGSGKTSLVKAYSEWVRRTLLLRTAVVNLDPGVEEPGYKPVLDIRDFFTL
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
RDVMIKYGLGPNGAFIKSSELIADYMEDILGRPPFSNIEKWDLVVVDTPGQMEAFIFRPA
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCH
SSVFLRRVSRLGNTVLVYLIDSSSIESVTDAVTLWFIYVLLQVKTGLPTIPVISKSDMAR
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
NREIVKLLIERPTDLLGMIRDDTGFAGDIIPDLLSIALKTMGPLRAVEVSALNKEGMDKL
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
HALLHEVFCACGDLT
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA