Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883588
Identifier: 218883588
GI number: 218883588
Start: 256624
End: 257190
Strand: Reverse
Name: 218883588
Synonym: DKAM_0277
Alternate gene names: NA
Gene position: 257190-256624 (Counterclockwise)
Preceding gene: 218883589
Following gene: 218883587
Centisome position: 18.84
GC content: 43.21
Gene sequence:
>567_bases ATGCCCGATAATTCACGACGGCTAGGGTTAAAGGTGGGTGTCATGCATATGGGTCAACCAGTGGAAATGGGTGTCTTAAC CGCGTTATTTACTGTATTATATGGATTAATCCTTTTAGTAGCCGGTAAACTCGTTTTAAAGGTGATGATTTCAATCGGGG GAGGGCTTCTAGGAGGGTATATAGCATATTTAACTATGTTACGCATGGGCTTTGGGACCCTGGGCTCGCTGGCTGTATTC CTCCTGGTATTTATAATTATATCACTTGTAAGCTGGTTCCTGTTTAAAATAGTGCTTTCAATATTGGCCGCAGCACCATT ATGGCTCATTATAGCAGGGGGTCTCGGGCTTTCCTACTCGAGTCTCCCAGCCTTATTAATACTGGTTATCCTTGTTGTAT TATTATACATTATATCAGAGAAATTGGCGAGCGTTGCTGCTTCCACGGCTGGGTTATTTATGTTGTACCTGGGACTCTCC AGCTTGGTTAATCCCCTGGTGGCTCTTACAGTAACTGTAATAGCATTACTTCTCCGCATATACCTATATGTAGCGTTCAA ATGGTGA
Upstream 100 bases:
>100_bases TAAAGAGGGCATGGATAAATTACATGCATTACTCCATGAAGTGTTCTGTGCCTGCGGAGATCTCACTTAAGGATTTATTT TTATATCTGGATATTATCAA
Downstream 100 bases:
>100_bases AAAAATGAAGCTATACAGGCCTAAGACGGCTGTAGGCAGGTACTACTCAATCCTGTTCTCTCTGCCCCACTGGGAGCTTC TGGCGGCTGTATTGATAGGG
Product: PMT multi-domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPDNSRRLGLKVGVMHMGQPVEMGVLTALFTVLYGLILLVAGKLVLKVMISIGGGLLGGYIAYLTMLRMGFGTLGSLAVF LLVFIIISLVSWFLFKIVLSILAAAPLWLIIAGGLGLSYSSLPALLILVILVVLLYIISEKLASVAASTAGLFMLYLGLS SLVNPLVALTVTVIALLLRIYLYVAFKW
Sequences:
>Translated_188_residues MPDNSRRLGLKVGVMHMGQPVEMGVLTALFTVLYGLILLVAGKLVLKVMISIGGGLLGGYIAYLTMLRMGFGTLGSLAVF LLVFIIISLVSWFLFKIVLSILAAAPLWLIIAGGLGLSYSSLPALLILVILVVLLYIISEKLASVAASTAGLFMLYLGLS SLVNPLVALTVTVIALLLRIYLYVAFKW >Mature_187_residues PDNSRRLGLKVGVMHMGQPVEMGVLTALFTVLYGLILLVAGKLVLKVMISIGGGLLGGYIAYLTMLRMGFGTLGSLAVFL LVFIIISLVSWFLFKIVLSILAAAPLWLIIAGGLGLSYSSLPALLILVILVVLLYIISEKLASVAASTAGLFMLYLGLSS LVNPLVALTVTVIALLLRIYLYVAFKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20101; Mature: 19970
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNSRRLGLKVGVMHMGQPVEMGVLTALFTVLYGLILLVAGKLVLKVMISIGGGLLGGY CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IAYLTMLRMGFGTLGSLAVFLLVFIIISLVSWFLFKIVLSILAAAPLWLIIAGGLGLSYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SLPALLILVILVVLLYIISEKLASVAASTAGLFMLYLGLSSLVNPLVALTVTVIALLLRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLYVAFKW HHHHHHCC >Mature Secondary Structure PDNSRRLGLKVGVMHMGQPVEMGVLTALFTVLYGLILLVAGKLVLKVMISIGGGLLGGY CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IAYLTMLRMGFGTLGSLAVFLLVFIIISLVSWFLFKIVLSILAAAPLWLIIAGGLGLSYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SLPALLILVILVVLLYIISEKLASVAASTAGLFMLYLGLSSLVNPLVALTVTVIALLLRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLYVAFKW HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA