Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883587
Identifier: 218883587
GI number: 218883587
Start: 254940
End: 256619
Strand: Reverse
Name: 218883587
Synonym: DKAM_0276
Alternate gene names: NA
Gene position: 256619-254940 (Counterclockwise)
Preceding gene: 218883588
Following gene: 218883586
Centisome position: 18.8
GC content: 46.37
Gene sequence:
>1680_bases ATGAAGCTATACAGGCCTAAGACGGCTGTAGGCAGGTACTACTCAATCCTGTTCTCTCTGCCCCACTGGGAGCTTCTGGC GGCTGTATTGATAGGGGTTTCAGTTATAGCCCTGTATGGGCTTAGAGAACGTGCTGTTCCCCTACTATTGAACGCTGTAT TAATCATTCTGTTTCTAGAGGCTTATCGAGTGTTCTATCCTTTAACTGTTTTCCATAAGTTGAAGAGGATAATTGGTTTA TCGCTGACCGTGCTTATATATACATTAATATACTACCTGCTACTCGGAGACTGGATCCTTGTCGTGGCGGCATCGTCAAC GATAGTTATAACTGTGATCCAGGGTCTCGACAGCACCAAGTGGTGGAGATATATTATAGCGGTTGCACCATCTTTCACAT CCATAGTGCTCTCAATGTGGATTACAAGCGGTGTTGTTTCACATACTGGTTTAGTAAAGGGTTTTTCACTAATACTGTTA TTCATTATAACTGACTACTTAATATACCTCGTCATGGGTAGGCATAGGATCAATGGTTATAAGGCACCTGATCTTGGATC GCTCTTCCTACAAAACTGGCTTGAGAGGAGAAAAGATATCGAGAAGGTGATTGATGAGCTGTCAACCAGTGAGGGCGTTC ACCCAAGGCTGATCTTCATGGATGACCTCTTAATAATATATACTGATCTACATTACGGCCCATTCTCGAACACGGGTAGC AGTGAGCTACCCGGCGAATTAAAGAAGTTGTTCTCCAGTCTAGGCTACTCGGTTGTAGCGCTCCACGGCTTCGGATCACA TGATAGAAACCTGGCGTCCTCAAGGTATCTGAGGGACTATGTGAGGAAAATATATACAGCCGTGATCGATGCCGAGAAAA CCAAGCTTAGATACCATGGTGCTTTAAAGCTAACAGGTGGAGACAGCTGGGAGGCCCTTGCACTGGTTTTCGATAGGTTG ACAATAGTCTTCGTCTCGAGGCCGGTGAAGGGGATAGATGATATACCCTACAACCTGTTCTTCCGCTACAACGTGATAGC GAGGAAGAGGGGGTTAGGCGACTTAATACTGGTTGACGCCCATAACTGGGAGAAACAAGAGGACTTCAACCTCGGTGAGC TGGATAAACTACTCGATGAAGTAGTTGAGAAAGCCATAGAGCTGAAGAAGCGGCCGCCTGTCGAGGTATTATTCAGGTAC AAGTGCTTTGAGACCAGCGCCCCCGGGCTTATACAGGGGAATGCATGCATCATCGAGGTTACCGGGGAGGGTAGGGAGCG GGTTGTCCTACTGTATCTACGCGGTAACAACATGAAGCCTGGTTCTCGAGATAAGCTTATCGATGTCCTCGGGAAGACCA CCGGAGCTGATTACGTAGAGGTATTCACAAATGATGAGCATAGTGAGACAGGTGTTAGATCATCGTTAGCATACATTCCA GTACATGATTCACCTGAGTTGCTCAGGGATACTGAAGTGGCTGCCAGGGAGTTAGTGGGTATGCCATATAGGCTTGGGGC ATGGCATTCTTCGACAAGGTTTGACACCAAGTTGATGGGTTATACAGCCGTAATGCTGGAGAAGCTGTTAATGGCCTCCT ATATAGAGGCATCGATCCTACTGTTATCCTATGCTTTCCTTCTACCAATTCTCCTAGCCGTCTTTAAAATAGCTCATTAA
Upstream 100 bases:
>100_bases GGACTCTCCAGCTTGGTTAATCCCCTGGTGGCTCTTACAGTAACTGTAATAGCATTACTTCTCCGCATATACCTATATGT AGCGTTCAAATGGTGAAAAA
Downstream 100 bases:
>100_bases ATTATTCGTGCCCCTATTCTTCAATAGTTTATAAAGCCTCTCCTCGATAATTACTATAAGCACGAGTGGTGGTCGGCATG AACACTATCCCTTTTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKLYRPKTAVGRYYSILFSLPHWELLAAVLIGVSVIALYGLRERAVPLLLNAVLIILFLEAYRVFYPLTVFHKLKRIIGL SLTVLIYTLIYYLLLGDWILVVAASSTIVITVIQGLDSTKWWRYIIAVAPSFTSIVLSMWITSGVVSHTGLVKGFSLILL FIITDYLIYLVMGRHRINGYKAPDLGSLFLQNWLERRKDIEKVIDELSTSEGVHPRLIFMDDLLIIYTDLHYGPFSNTGS SELPGELKKLFSSLGYSVVALHGFGSHDRNLASSRYLRDYVRKIYTAVIDAEKTKLRYHGALKLTGGDSWEALALVFDRL TIVFVSRPVKGIDDIPYNLFFRYNVIARKRGLGDLILVDAHNWEKQEDFNLGELDKLLDEVVEKAIELKKRPPVEVLFRY KCFETSAPGLIQGNACIIEVTGEGRERVVLLYLRGNNMKPGSRDKLIDVLGKTTGADYVEVFTNDEHSETGVRSSLAYIP VHDSPELLRDTEVAARELVGMPYRLGAWHSSTRFDTKLMGYTAVMLEKLLMASYIEASILLLSYAFLLPILLAVFKIAH
Sequences:
>Translated_559_residues MKLYRPKTAVGRYYSILFSLPHWELLAAVLIGVSVIALYGLRERAVPLLLNAVLIILFLEAYRVFYPLTVFHKLKRIIGL SLTVLIYTLIYYLLLGDWILVVAASSTIVITVIQGLDSTKWWRYIIAVAPSFTSIVLSMWITSGVVSHTGLVKGFSLILL FIITDYLIYLVMGRHRINGYKAPDLGSLFLQNWLERRKDIEKVIDELSTSEGVHPRLIFMDDLLIIYTDLHYGPFSNTGS SELPGELKKLFSSLGYSVVALHGFGSHDRNLASSRYLRDYVRKIYTAVIDAEKTKLRYHGALKLTGGDSWEALALVFDRL TIVFVSRPVKGIDDIPYNLFFRYNVIARKRGLGDLILVDAHNWEKQEDFNLGELDKLLDEVVEKAIELKKRPPVEVLFRY KCFETSAPGLIQGNACIIEVTGEGRERVVLLYLRGNNMKPGSRDKLIDVLGKTTGADYVEVFTNDEHSETGVRSSLAYIP VHDSPELLRDTEVAARELVGMPYRLGAWHSSTRFDTKLMGYTAVMLEKLLMASYIEASILLLSYAFLLPILLAVFKIAH >Mature_559_residues MKLYRPKTAVGRYYSILFSLPHWELLAAVLIGVSVIALYGLRERAVPLLLNAVLIILFLEAYRVFYPLTVFHKLKRIIGL SLTVLIYTLIYYLLLGDWILVVAASSTIVITVIQGLDSTKWWRYIIAVAPSFTSIVLSMWITSGVVSHTGLVKGFSLILL FIITDYLIYLVMGRHRINGYKAPDLGSLFLQNWLERRKDIEKVIDELSTSEGVHPRLIFMDDLLIIYTDLHYGPFSNTGS SELPGELKKLFSSLGYSVVALHGFGSHDRNLASSRYLRDYVRKIYTAVIDAEKTKLRYHGALKLTGGDSWEALALVFDRL TIVFVSRPVKGIDDIPYNLFFRYNVIARKRGLGDLILVDAHNWEKQEDFNLGELDKLLDEVVEKAIELKKRPPVEVLFRY KCFETSAPGLIQGNACIIEVTGEGRERVVLLYLRGNNMKPGSRDKLIDVLGKTTGADYVEVFTNDEHSETGVRSSLAYIP VHDSPELLRDTEVAARELVGMPYRLGAWHSSTRFDTKLMGYTAVMLEKLLMASYIEASILLLSYAFLLPILLAVFKIAH
Specific function: Unknown
COG id: COG3356
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63256; Mature: 63256
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYRPKTAVGRYYSILFSLPHWELLAAVLIGVSVIALYGLRERAVPLLLNAVLIILFLE CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRVFYPLTVFHKLKRIIGLSLTVLIYTLIYYLLLGDWILVVAASSTIVITVIQGLDSTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH WWRYIIAVAPSFTSIVLSMWITSGVVSHTGLVKGFSLILLFIITDYLIYLVMGRHRINGY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC KAPDLGSLFLQNWLERRKDIEKVIDELSTSEGVHPRLIFMDDLLIIYTDLHYGPFSNTGS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCC SELPGELKKLFSSLGYSVVALHGFGSHDRNLASSRYLRDYVRKIYTAVIDAEKTKLRYHG CCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEC ALKLTGGDSWEALALVFDRLTIVFVSRPVKGIDDIPYNLFFRYNVIARKRGLGDLILVDA EEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEC HNWEKQEDFNLGELDKLLDEVVEKAIELKKRPPVEVLFRYKCFETSAPGLIQGNACIIEV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCCCCEEECCEEEEEE TGEGRERVVLLYLRGNNMKPGSRDKLIDVLGKTTGADYVEVFTNDEHSETGVRSSLAYIP ECCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCEEEEE VHDSPELLRDTEVAARELVGMPYRLGAWHSSTRFDTKLMGYTAVMLEKLLMASYIEASIL CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLSYAFLLPILLAVFKIAH HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLYRPKTAVGRYYSILFSLPHWELLAAVLIGVSVIALYGLRERAVPLLLNAVLIILFLE CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRVFYPLTVFHKLKRIIGLSLTVLIYTLIYYLLLGDWILVVAASSTIVITVIQGLDSTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH WWRYIIAVAPSFTSIVLSMWITSGVVSHTGLVKGFSLILLFIITDYLIYLVMGRHRINGY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC KAPDLGSLFLQNWLERRKDIEKVIDELSTSEGVHPRLIFMDDLLIIYTDLHYGPFSNTGS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCC SELPGELKKLFSSLGYSVVALHGFGSHDRNLASSRYLRDYVRKIYTAVIDAEKTKLRYHG CCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEC ALKLTGGDSWEALALVFDRLTIVFVSRPVKGIDDIPYNLFFRYNVIARKRGLGDLILVDA EEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEC HNWEKQEDFNLGELDKLLDEVVEKAIELKKRPPVEVLFRYKCFETSAPGLIQGNACIIEV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCCCCEEECCEEEEEE TGEGRERVVLLYLRGNNMKPGSRDKLIDVLGKTTGADYVEVFTNDEHSETGVRSSLAYIP ECCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCEEEEE VHDSPELLRDTEVAARELVGMPYRLGAWHSSTRFDTKLMGYTAVMLEKLLMASYIEASIL CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLSYAFLLPILLAVFKIAH HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA