Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is proB [H]
Identifier: 218710379
GI number: 218710379
Start: 2585232
End: 2586416
Strand: Reverse
Name: proB [H]
Synonym: VS_2416
Alternate gene names: 218710379
Gene position: 2586416-2585232 (Counterclockwise)
Preceding gene: 218710380
Following gene: 218710378
Centisome position: 78.39
GC content: 47.17
Gene sequence:
>1185_bases TTGCTAAAACATCACCTCTTATTTGTTTTATCCATAAAAGACTTCATGACAACAAATCATCAAAGCGGGACAACAACACA GCGTAAAACTGTCGTTGTTAAACTGGGTACCAGTGTCTTAACTGGTGGAACATTGGCATTAGACCGCGCTCATATGGTTG AGCTGGTTCGTCAATGTGCTGAATTAAAAAAACAAGGCCACTCTGTGGTTATGGTTTCGTCTGGCGCAATTGCAGCCGGA CGTGAGCACCTTGGTTACCCCGCACTTCCCAACTCGATGGCAAGCAAACAATTGCTTGCGGCAGTTGGGCAAAGTCAGTT GATTCAAGTTTGGGAGTCTTTGTTTGCTATCTATGGCCTTAAGATTGGCCAGATGCTACTGACTCGTGCTGATCTCGATG ATCGCGAGCGTTTTCTTAATGCACGTGACACGATCAATGCACTTGTTGAGCACGATATTATTCCGGTAGTAAACGAAAAC GACGCAGTAGCCACCAACGAAATTAAAGTTGGCGACAATGATAACTTGTCGGCCTTAGTGGGTATTTTGTGCGGTGCTGA TAAGCTTTTGCTATTAACGGACCAAAAAGGCCTGTTTACGGCTGACCCTCGTAAAGACCCAAATGCTGAGCTCATCAAAG AAGTGAAAACTATTGATGACACACTGCGCAAGATCGCAGGCGGCAGTGGTACTACGTTAGGTACTGGCGGCATGGCGACA AAACTGCAGGCGGCTGATATTGCTCGTCGCGCTGGCATCGAAGTAATTATTGCTGCGGGCAGTGCTGAAAATGTAGTGTT TGACTCACTGAGTGACAACCCACAAGGCACACGTTTCTTGCCTTTAGCGGAAGCGCTTGAAAACCGTAAACGCTGGATTC TAGCGGGCCCTGCTTCAGCTGGTGACATTGTAGTCGACGACGGCGCAGTAAACGCAGTTAACACCAAAGGCAGCAGCTTG TTGGCGAAAGGGGTTGTTCGAGTTAAAGGCGAATTCTCTCGTGGTGAAGTCACCCAAGTCACAGACAGCAAAGGCAAAGT AATTGCGCGTGGTATCGCCAGTTATTCAAGCCAAGACCTAGCAAAAATTGCAGGCAAGCACAGTAAAGATATTGGCGATA TTCTTGGATACGATTACGGGTCGGAAGTCATTCACCGTGACGACCTTGTTGTAATCCAAGAATAG
Upstream 100 bases:
>100_bases GAAGAGTCTGTCGAATTCGTCTGATTTTAAAGGTTACTCTTCTATATAAAGCAAAAAGGTGCGATTTCGCACCTTTTCTG CTTGTGAATTCCCCTTTTGA
Downstream 100 bases:
>100_bases CTCGTGATGAGAAGGCGAATCACCTTTTTGCATCCAAAGACAGACAGAATTTAGGGAGAGTTAAACGTGGATTTAACTAA CATGGGTATTGCAGCAAAAG
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLKHHLLFVLSIKDFMTTNHQSGTTTQRKTVVVKLGTSVLTGGTLALDRAHMVELVRQCAELKKQGHSVVMVSSGAIAAG REHLGYPALPNSMASKQLLAAVGQSQLIQVWESLFAIYGLKIGQMLLTRADLDDRERFLNARDTINALVEHDIIPVVNEN DAVATNEIKVGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMAT KLQAADIARRAGIEVIIAAGSAENVVFDSLSDNPQGTRFLPLAEALENRKRWILAGPASAGDIVVDDGAVNAVNTKGSSL LAKGVVRVKGEFSRGEVTQVTDSKGKVIARGIASYSSQDLAKIAGKHSKDIGDILGYDYGSEVIHRDDLVVIQE
Sequences:
>Translated_394_residues MLKHHLLFVLSIKDFMTTNHQSGTTTQRKTVVVKLGTSVLTGGTLALDRAHMVELVRQCAELKKQGHSVVMVSSGAIAAG REHLGYPALPNSMASKQLLAAVGQSQLIQVWESLFAIYGLKIGQMLLTRADLDDRERFLNARDTINALVEHDIIPVVNEN DAVATNEIKVGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMAT KLQAADIARRAGIEVIIAAGSAENVVFDSLSDNPQGTRFLPLAEALENRKRWILAGPASAGDIVVDDGAVNAVNTKGSSL LAKGVVRVKGEFSRGEVTQVTDSKGKVIARGIASYSSQDLAKIAGKHSKDIGDILGYDYGSEVIHRDDLVVIQE >Mature_394_residues MLKHHLLFVLSIKDFMTTNHQSGTTTQRKTVVVKLGTSVLTGGTLALDRAHMVELVRQCAELKKQGHSVVMVSSGAIAAG REHLGYPALPNSMASKQLLAAVGQSQLIQVWESLFAIYGLKIGQMLLTRADLDDRERFLNARDTINALVEHDIIPVVNEN DAVATNEIKVGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMAT KLQAADIARRAGIEVIIAAGSAENVVFDSLSDNPQGTRFLPLAEALENRKRWILAGPASAGDIVVDDGAVNAVNTKGSSL LAKGVVRVKGEFSRGEVTQVTDSKGKVIARGIASYSSQDLAKIAGKHSKDIGDILGYDYGSEVIHRDDLVVIQE
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=283, Percent_Identity=31.8021201413428, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI62912457, Length=281, Percent_Identity=31.6725978647687, Blast_Score=121, Evalue=1e-27, Organism=Escherichia coli, GI1786437, Length=362, Percent_Identity=65.1933701657459, Blast_Score=476, Evalue=1e-136, Organism=Caenorhabditis elegans, GI17569967, Length=267, Percent_Identity=34.0823970037453, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17569969, Length=267, Percent_Identity=34.0823970037453, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6321822, Length=416, Percent_Identity=36.0576923076923, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6320506, Length=417, Percent_Identity=35.9712230215827, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI21357643, Length=291, Percent_Identity=33.6769759450172, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 42007; Mature: 42007
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKHHLLFVLSIKDFMTTNHQSGTTTQRKTVVVKLGTSVLTGGTLALDRAHMVELVRQCA CCCCEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHH ELKKQGHSVVMVSSGAIAAGREHLGYPALPNSMASKQLLAAVGQSQLIQVWESLFAIYGL HHHHCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KIGQMLLTRADLDDRERFLNARDTINALVEHDIIPVVNENDAVATNEIKVGDNDNLSALV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCHHHHH GILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMAT HHHHCCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHH KLQAADIARRAGIEVIIAAGSAENVVFDSLSDNPQGTRFLPLAEALENRKRWILAGPASA HHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCEEEHHHHHHHCCCEEEEECCCCC GDIVVDDGAVNAVNTKGSSLLAKGVVRVKGEFSRGEVTQVTDSKGKVIARGIASYSSQDL CCEEEECCCEEEECCCCHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHCCHHHH AKIAGKHSKDIGDILGYDYGSEVIHRDDLVVIQE HHHHCCCCCCHHHHHCCCCCCCCEECCCEEEEEC >Mature Secondary Structure MLKHHLLFVLSIKDFMTTNHQSGTTTQRKTVVVKLGTSVLTGGTLALDRAHMVELVRQCA CCCCEEEEEEEHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHH ELKKQGHSVVMVSSGAIAAGREHLGYPALPNSMASKQLLAAVGQSQLIQVWESLFAIYGL HHHHCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH KIGQMLLTRADLDDRERFLNARDTINALVEHDIIPVVNENDAVATNEIKVGDNDNLSALV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCHHHHH GILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMAT HHHHCCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHH KLQAADIARRAGIEVIIAAGSAENVVFDSLSDNPQGTRFLPLAEALENRKRWILAGPASA HHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCEEEHHHHHHHCCCEEEEECCCCC GDIVVDDGAVNAVNTKGSSLLAKGVVRVKGEFSRGEVTQVTDSKGKVIARGIASYSSQDL CCEEEECCCEEEECCCCHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHCCHHHH AKIAGKHSKDIGDILGYDYGSEVIHRDDLVVIQE HHHHCCCCCCHHHHHCCCCCCCCEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA