Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710344

Identifier: 218710344

GI number: 218710344

Start: 2549158

End: 2549499

Strand: Reverse

Name: 218710344

Synonym: VS_2380

Alternate gene names: NA

Gene position: 2549499-2549158 (Counterclockwise)

Preceding gene: 218710345

Following gene: 218710343

Centisome position: 77.27

GC content: 42.69

Gene sequence:

>342_bases
ATGAAAGCATTGTTGATAGCATCTCTATGTACGGTAGCGTTATTCGGATGCTCTAAATCAGCAGCTCCTGAGACTGAGAG
CGCAGTATCGGACGATCAATTCGTGATTTATCAATGTGAGTCTGACGCTTCATTTAAGGTCGCTTACCTTGGTGATGAAA
AAGCGGTATTACGTTTACCCGAGAATGAATATCGCCTCACTCAAATAGCGGCAGGCTCAGGAACGAAGTACATCTTAGAT
GATGGAACCTCTGAACTGATCAATAGCGTAACTTTACGAACTAAAGGTGACAATGCACGTCTAGAACTTGGTCGTGTTAT
CTATAAAAACTGCCGAAAGTAG

Upstream 100 bases:

>100_bases
CAGTATTAAAGATGTACCAGCATTCTTAAAAGGTTAAGACACTAAGTCTCTTTCACTTAGATATAAGTGTTATTCACTAT
ATAAAGATGAGGAACGCAGT

Downstream 100 bases:

>100_bases
GTCATAGTTATCGACTAGGATTTACAAACAGTTAAGTGAGGGAGTTCGCCCTCACTTTTTCTTTCTCTTCCCTTTAACGT
CAGACTTTTTATGAGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD
DGTSELINSVTLRTKGDNARLELGRVIYKNCRK

Sequences:

>Translated_113_residues
MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD
DGTSELINSVTLRTKGDNARLELGRVIYKNCRK
>Mature_113_residues
MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLPENEYRLTQIAAGSGTKYILD
DGTSELINSVTLRTKGDNARLELGRVIYKNCRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12330; Mature: 12330

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECC
ENEYRLTQIAAGSGTKYILDDGTSELINSVTLRTKGDNARLELGRVIYKNCRK
CCCEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCCCCEEHHHHHHHHHCCC
>Mature Secondary Structure
MKALLIASLCTVALFGCSKSAAPETESAVSDDQFVIYQCESDASFKVAYLGDEKAVLRLP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECC
ENEYRLTQIAAGSGTKYILDDGTSELINSVTLRTKGDNARLELGRVIYKNCRK
CCCEEEEEEECCCCCEEEEECCHHHHHHEEEEEECCCCCEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA