| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709356
Identifier: 218709356
GI number: 218709356
Start: 1475326
End: 1475475
Strand: Direct
Name: 218709356
Synonym: VS_1365
Alternate gene names: NA
Gene position: 1475326-1475475 (Clockwise)
Preceding gene: 218709355
Following gene: 218709358
Centisome position: 44.72
GC content: 44.0
Gene sequence:
>150_bases GTGGAGCTAACTATGAAAAATTTAGGGCCAATGAGCTACAGTTTCTTTCGAAGTGAACCTACTTATAACTCGAGTGGTCG ACGAAACAACGTATCTGGAGTGCAGGTCGGAGTTCCACCTAAAAATGGGACGCAGATAGCTAGGTCATAA
Upstream 100 bases:
>100_bases CAGCTCAATTTATTTCGCTTTACGACAATAGTGAGATTGTTAGTGTGGCTAAAGTAGTTTAAATGCCTTGTTGTCTTATA TGGAGAGACATAAGTAGAGC
Downstream 100 bases:
>100_bases GATTGGGAGAGATGATTGAAGTCATACTTTTGTAAGCTTACGATATCTAAATACTATTCGAAATGCATATAATCATCACC AGTGTTATAGGTAAATAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MELTMKNLGPMSYSFFRSEPTYNSSGRRNNVSGVQVGVPPKNGTQIARS
Sequences:
>Translated_49_residues MELTMKNLGPMSYSFFRSEPTYNSSGRRNNVSGVQVGVPPKNGTQIARS >Mature_49_residues MELTMKNLGPMSYSFFRSEPTYNSSGRRNNVSGVQVGVPPKNGTQIARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5392; Mature: 5392
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTMKNLGPMSYSFFRSEPTYNSSGRRNNVSGVQVGVPPKNGTQIARS CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MELTMKNLGPMSYSFFRSEPTYNSSGRRNNVSGVQVGVPPKNGTQIARS CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA