Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709271

Identifier: 218709271

GI number: 218709271

Start: 1376482

End: 1376715

Strand: Direct

Name: 218709271

Synonym: VS_1278

Alternate gene names: NA

Gene position: 1376482-1376715 (Clockwise)

Preceding gene: 218709270

Following gene: 218709272

Centisome position: 41.72

GC content: 36.75

Gene sequence:

>234_bases
ATGAGGATTGTGATTTTTATCGCTACAGTGATTTTAGTTAAATCAATTGAAGCAAAGTTTGGACACACCTATAACATCTT
TTCAGATCCACTTGATATCAAGTTAGCCGCTCTTGATTTTGTCTTGTGGGTTTCAGTCTACTTTGGTTTATCTCTTGTTT
ATGAGAAGGGCAAAGGCATCCTGACTAAAATGGGTAAAGTTAAGAGTCCATCGAGTAATTTGCCCCCACATTAA

Upstream 100 bases:

>100_bases
CGACATGTAGGGCTATAAACGCATTATATACTTGGAATAACTTAAACAATATCCACGCGCATGTGTACGATTTAGTTTAA
ACGTATAGATAGGGAAACCC

Downstream 100 bases:

>100_bases
GCTGTCATAATGTAATCTGCATATTGTTGGTGATATGAGTCAAGAGTTGAAAGCGGTTTGAAGAAGGGATAGCTATGAAT
GGAAAAATTGTTCGATGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH

Sequences:

>Translated_77_residues
MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH
>Mature_77_residues
MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8567; Mature: 8567

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGI
CEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LTKMGKVKSPSSNLPPH
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGI
CEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LTKMGKVKSPSSNLPPH
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA