| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709271
Identifier: 218709271
GI number: 218709271
Start: 1376482
End: 1376715
Strand: Direct
Name: 218709271
Synonym: VS_1278
Alternate gene names: NA
Gene position: 1376482-1376715 (Clockwise)
Preceding gene: 218709270
Following gene: 218709272
Centisome position: 41.72
GC content: 36.75
Gene sequence:
>234_bases ATGAGGATTGTGATTTTTATCGCTACAGTGATTTTAGTTAAATCAATTGAAGCAAAGTTTGGACACACCTATAACATCTT TTCAGATCCACTTGATATCAAGTTAGCCGCTCTTGATTTTGTCTTGTGGGTTTCAGTCTACTTTGGTTTATCTCTTGTTT ATGAGAAGGGCAAAGGCATCCTGACTAAAATGGGTAAAGTTAAGAGTCCATCGAGTAATTTGCCCCCACATTAA
Upstream 100 bases:
>100_bases CGACATGTAGGGCTATAAACGCATTATATACTTGGAATAACTTAAACAATATCCACGCGCATGTGTACGATTTAGTTTAA ACGTATAGATAGGGAAACCC
Downstream 100 bases:
>100_bases GCTGTCATAATGTAATCTGCATATTGTTGGTGATATGAGTCAAGAGTTGAAAGCGGTTTGAAGAAGGGATAGCTATGAAT GGAAAAATTGTTCGATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH
Sequences:
>Translated_77_residues MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH >Mature_77_residues MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGILTKMGKVKSPSSNLPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8567; Mature: 8567
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGI CEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH LTKMGKVKSPSSNLPPH HHHCCCCCCCCCCCCCC >Mature Secondary Structure MRIVIFIATVILVKSIEAKFGHTYNIFSDPLDIKLAALDFVLWVSVYFGLSLVYEKGKGI CEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH LTKMGKVKSPSSNLPPH HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA