Click here to switch to the map view.

The map label for this gene is 218709270

Identifier: 218709270

GI number: 218709270

Start: 1375760

End: 1376260

Strand: Direct

Name: 218709270

Synonym: VS_1277

Alternate gene names: NA

Gene position: 1375760-1376260 (Clockwise)

Preceding gene: 218709269

Following gene: 218709271

Centisome position: 41.7

GC content: 41.72

Gene sequence:

>501_bases
ATGAGTGAGATTGCTCGCTTTATATCTGGTGAAGCGCCAGATAAATTTGGTCGAAATATAGAACAGTTATTGGCTTACAA
TCATTTTTGGTTGGAGCATGACCATAAGTACATTCAAGTGTTCTTCCCAATAGATGAGGGGACTAAGTTTAATCAACATG
CACCGTTGGTTACTCAAGACGATAGGGTAATTTTTGCTAATTCAGAAGCGCTTCGCATAGCTCATCTACAAGTTCTTGAC
CTGATGCTTGAGTTTTGGGGTATGCAGCGGAACGGGAGTGAAATATCGTCATCGTTGCCACTTAGCCCGGCAAATCACGT
ATGGCTTAAAAACCATGATCATAACCAACTAAGGTTAACGCGAGCTATTCGTAGTTTATATTTGTTAGGCAATGAGGAAG
TTGCGACCAACTTATGTGGCTTCTTGATCGCATCAGCGAACGAAACCGGTTCTGTCTCTGATAAAACGGTGCAATATTGG
CGTAATGCGTTAAATGGTTAG

Upstream 100 bases:

>100_bases
AGATCGATACTTACAACGTAAAGGACTAGGCTTTTCAAGGCTGACTGCGTAATAATGCATTCGCCCACAAGTGGGGGTTT
ATAGTCAGTAGGATTTTAAA

Downstream 100 bases:

>100_bases
AAGTCCGCAATAGCCAGTGGGATTATCGATTTTCAGCACGTGGCAGTAGCAATAGATTTGATGGTCGTTGGCATTTAACC
AATGGCCCGTGTAAAGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Opioid Growth Factor Receptor Conserved Region Superfamily; Opioid Growth Factor Receptor Region

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSEIARFISGEAPDKFGRNIEQLLAYNHFWLEHDHKYIQVFFPIDEGTKFNQHAPLVTQDDRVIFANSEALRIAHLQVLD
LMLEFWGMQRNGSEISSSLPLSPANHVWLKNHDHNQLRLTRAIRSLYLLGNEEVATNLCGFLIASANETGSVSDKTVQYW
RNALNG

Sequences:

>Translated_166_residues
MSEIARFISGEAPDKFGRNIEQLLAYNHFWLEHDHKYIQVFFPIDEGTKFNQHAPLVTQDDRVIFANSEALRIAHLQVLD
LMLEFWGMQRNGSEISSSLPLSPANHVWLKNHDHNQLRLTRAIRSLYLLGNEEVATNLCGFLIASANETGSVSDKTVQYW
RNALNG
>Mature_165_residues
SEIARFISGEAPDKFGRNIEQLLAYNHFWLEHDHKYIQVFFPIDEGTKFNQHAPLVTQDDRVIFANSEALRIAHLQVLDL
MLEFWGMQRNGSEISSSLPLSPANHVWLKNHDHNQLRLTRAIRSLYLLGNEEVATNLCGFLIASANETGSVSDKTVQYWR
NALNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18993; Mature: 18861

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIARFISGEAPDKFGRNIEQLLAYNHFWLEHDHKYIQVFFPIDEGTKFNQHAPLVTQD
CHHHHHHHCCCCCHHHHCCHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCEEECC
DRVIFANSEALRIAHLQVLDLMLEFWGMQRNGSEISSSLPLSPANHVWLKNHDHNQLRLT
CEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHH
RAIRSLYLLGNEEVATNLCGFLIASANETGSVSDKTVQYWRNALNG
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SEIARFISGEAPDKFGRNIEQLLAYNHFWLEHDHKYIQVFFPIDEGTKFNQHAPLVTQD
HHHHHHHCCCCCHHHHCCHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCEEECC
DRVIFANSEALRIAHLQVLDLMLEFWGMQRNGSEISSSLPLSPANHVWLKNHDHNQLRLT
CEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHH
RAIRSLYLLGNEEVATNLCGFLIASANETGSVSDKTVQYWRNALNG
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA