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The map label for this gene is yieP [H]

Identifier: 218709244

GI number: 218709244

Start: 1347314

End: 1348033

Strand: Direct

Name: yieP [H]

Synonym: VS_1251

Alternate gene names: 218709244

Gene position: 1347314-1348033 (Clockwise)

Preceding gene: 218709241

Following gene: 218709245

Centisome position: 40.84

GC content: 43.47

Gene sequence:

>720_bases
ATGGCAGAAACTTTCAAATCTATTTCAGGCTCTAAGCGAAGCCTTCATGTGCAGGTGGCACGTGAAATCGCTCGTGGTAT
TTTGTCGGGTAATTTACCTCAGGGTTCGATTATCCCTGGTGAGATGGCTCTGTGTGAGCAGTTTGGTATTAGCCGCACGG
CGTTGCGAGAGGCGGTGAAACTTCTAACTTCAAAAGGCCTTTTAGAGTCACGCCCTAAAATCGGCACTCGCGTTGTTGAT
CGTGCATACTGGAACTTTTTAGATCCTCAGCTTATCGAATGGATGGATGGACTAGCTGATACCGATCAGTTTTGTCATCA
GTTTTTAGGTTTACGTCGTGCGATTGAACCTGAAGCGTGTGCATTGGCAGCTAAGTTTGCAACTGCAGAGCAACGTATTG
AATTATCAGAAATTTTCCAAAAAATGGTAGAAATTTCTAGCGAAGAAACGCTTGATCAAGCTCGCTGGTTAGATATTGAT
ATGAAGTTCCATAGCCTTATCTTCAATGCAACGGGTAATGATTTCTACTTACCGTTTGGCAACATATTGACGACGATGTT
TGTTAACTTTATTGTGCACTCTTCAGAAGAAGGCAGCACATGCATTAACGAACATCGCGCAATATACGAAGCCATTATGG
CAGGCAATAGTGATAAAGCACGCCAAGTTTCGGCAAGTCACTTGCAAGAATCAAACCACCGATTGCCTGTAACAAGCTAA

Upstream 100 bases:

>100_bases
TATAAGGGAGCTCACGTTATTATCCCCCTCATTTGGTGCATTATACTTTCAGTGCTATAATACGAGTTAAATAATACATA
TCTAATAAGTAAGTAGACTC

Downstream 100 bases:

>100_bases
CTGAAAGCACTTGATGTGCCCTTACAAATTTTAAAGCACGCATTTAGCGTGCTTTTTTGTATCTGTATTTTTATGTTTCT
GACATTGCACTTCTTATTCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAETFKSISGSKRSLHVQVAREIARGILSGNLPQGSIIPGEMALCEQFGISRTALREAVKLLTSKGLLESRPKIGTRVVD
RAYWNFLDPQLIEWMDGLADTDQFCHQFLGLRRAIEPEACALAAKFATAEQRIELSEIFQKMVEISSEETLDQARWLDID
MKFHSLIFNATGNDFYLPFGNILTTMFVNFIVHSSEEGSTCINEHRAIYEAIMAGNSDKARQVSASHLQESNHRLPVTS

Sequences:

>Translated_239_residues
MAETFKSISGSKRSLHVQVAREIARGILSGNLPQGSIIPGEMALCEQFGISRTALREAVKLLTSKGLLESRPKIGTRVVD
RAYWNFLDPQLIEWMDGLADTDQFCHQFLGLRRAIEPEACALAAKFATAEQRIELSEIFQKMVEISSEETLDQARWLDID
MKFHSLIFNATGNDFYLPFGNILTTMFVNFIVHSSEEGSTCINEHRAIYEAIMAGNSDKARQVSASHLQESNHRLPVTS
>Mature_238_residues
AETFKSISGSKRSLHVQVAREIARGILSGNLPQGSIIPGEMALCEQFGISRTALREAVKLLTSKGLLESRPKIGTRVVDR
AYWNFLDPQLIEWMDGLADTDQFCHQFLGLRRAIEPEACALAAKFATAEQRIELSEIFQKMVEISSEETLDQARWLDIDM
KFHSLIFNATGNDFYLPFGNILTTMFVNFIVHSSEEGSTCINEHRAIYEAIMAGNSDKARQVSASHLQESNHRLPVTS

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=211, Percent_Identity=36.4928909952607, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI48994955, Length=218, Percent_Identity=23.394495412844, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786303, Length=213, Percent_Identity=31.924882629108, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789353, Length=229, Percent_Identity=24.8908296943231, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790032, Length=224, Percent_Identity=29.9107142857143, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26765; Mature: 26634

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETFKSISGSKRSLHVQVAREIARGILSGNLPQGSIIPGEMALCEQFGISRTALREAVK
CCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
LLTSKGLLESRPKIGTRVVDRAYWNFLDPQLIEWMDGLADTDQFCHQFLGLRRAIEPEAC
HHHHCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
ALAAKFATAEQRIELSEIFQKMVEISSEETLDQARWLDIDMKFHSLIFNATGNDFYLPFG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCHH
NILTTMFVNFIVHSSEEGSTCINEHRAIYEAIMAGNSDKARQVSASHLQESNHRLPVTS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AETFKSISGSKRSLHVQVAREIARGILSGNLPQGSIIPGEMALCEQFGISRTALREAVK
CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
LLTSKGLLESRPKIGTRVVDRAYWNFLDPQLIEWMDGLADTDQFCHQFLGLRRAIEPEAC
HHHHCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
ALAAKFATAEQRIELSEIFQKMVEISSEETLDQARWLDIDMKFHSLIFNATGNDFYLPFG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEECCHH
NILTTMFVNFIVHSSEEGSTCINEHRAIYEAIMAGNSDKARQVSASHLQESNHRLPVTS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]