Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709245

Identifier: 218709245

GI number: 218709245

Start: 1348238

End: 1350100

Strand: Direct

Name: 218709245

Synonym: VS_1252

Alternate gene names: NA

Gene position: 1348238-1350100 (Clockwise)

Preceding gene: 218709244

Following gene: 218709246

Centisome position: 40.86

GC content: 45.84

Gene sequence:

>1863_bases
ATGCCTCAATCTCTTTTGCCAAATATTCTTCAATTTATCGGTCAGATAGATCCTTTCGATAAGATCCCTAAACAAGCACT
TCGTGAACTTGCCTCCAATGTTCAGATCACTTATCTCGGCAAGGGGGATGTGGTTGATCTATGTGAGTCGGGTAAAGAAA
AGTCGCTTTACATCATCCGAACCGGTTCTATGGAGCAAAGAAAGTCAGACGGTGTACTTCGTGCTCGTTTAGGCAGTGAA
GACTTGTTCGGCTTTACGTTCTTAGATTCTGAAGTTAATGACGAGAAAGGCTACAGAGCGATCGCAATCGAAAATAGCTT
ACTTTATGTGATTCCACATTCGGCGCTTCAAGCGTTGTTCAAGGCATTCCCAAGCTGCGCAGAACACTTTGCATCACAGG
CGCAGGTTCGGTTGAAGTCGGCACTTGATGTTGTGTGGTCAAATAAAGAAAAAGGCTTGTTCATTCGTAAGGTTGAAGAA
GTGGCAAGCGGGCAGGTGGCTATCGTTAAGTCTGAACAAACTATTCAGTCGGTCGCGGTTGAAATGCTTCATCAACGCTC
GCCATGTGCCGTGATCTATGAGGGTGAAACCATTGTTGGTTTGATTACTGACCGTGACATGACTAAGCGAGTGATCGCCC
ACGGTGTCAGCACTGATAGCCTGATCTCCGAGGTGATGACGCATTCTCCAGTGACGGTAAAACCGGATGATCTGGTGCTG
CATGCTGCGTCTATCATGATGCAATTCAACATCCGTAACTTGCCCGTTGTGAAAGAGAATAAGGTCGTTGGTCTTCTCAC
TACGTCTCACTTAGTTCAAAACCACCGTGTCCAAGCGATCTTCTTAATCGAGAAAATCAAATACGCGGGCAGTGTGAAAA
CCATGTCTTCGTTTACCCCAGAGCGACAAGCTATTTTTGAAGCGCTGGTGGAAGGCAAGGTTGCACCGGAAACCGTAGGT
AAGGTCATGACCATGATTATGGACGCCTACACACGCCGATTGATTCAGATAGCGATTGATAAGTTAGGCCCACCACCTTG
TGATTTTTCTTGGATTGTTGCGGGCTCGCACGCTCGTAATGAAGTTCATATGCTGTCGGATCAAGATAGTGCGATTGTAC
TCTCTGACGATGCGACAGACAGTGACCGTATTTACTTCAAACATTTAGCGATGATGGTGACTAACGGATTAGCGAGTTGT
GATTATCCATTGTGTCCGGGTAAATTCATGGCTGCGACACCAAAATGGTGTCAGCCACTCAGCGTTTGGAAGCACTACTA
CAAGAAGTGGGTGGCTAACCCTGAGTACGAACGCTTACTCAACATCAGTGTGTTCCTAGAAATTCGAACCATCTATGGCA
ACAGTGAGTTCGAAGGCATTCTTCGTGATGAGTTGCATTCTAACATTCGCAGCAACCGTGAGTTTTTAAGCACACTAGTG
AAAGATGCGGTAAACACCAACCCGCCATTGGGTATTTTCAATAGTTTGGTTCTAGAGAAATCGGGTGAGAACAAGAAAAC
ACTCAATGTGAAGAAGTACGCCATTAACTTGATTATTGATCTTGCGCGTATTTACGGATTAGCGGTGGAATGTGATTTGT
CAGCAACCGATGAACGTTTCGCAGCTGCCAATGAAAAAGGCATGCTGAGCGACGACGCATTCAAGAACATTCTGGGCTCT
TACCAGTTCATTCTCTCTTTCCGATTTGGTCATCAACTTGAAGCGCTGAAGAACGGGGATGTGCCTGACAACAACATCAA
CCCAGATAGCTTTGGTAGCTTTGAGCGTAAACACTTGAAAGATGCCTTTAGGATCATTGCTGACCTTCAAGAAGCCGCGA
AAATCCGTTTCGGAGCACGCTAA

Upstream 100 bases:

>100_bases
TCTAAAACTTGATCAATTCTGCTATTCAACCTAAAAATCAACTCGCAACTCGATATATTAATTATATAATAATACTAATC
AAACAAATGCGAGTATGGTT

Downstream 100 bases:

>100_bases
TGAAATCGTTTTTAAATTACTTTCATCCTCTTGAGAAAATTAAGCGCACACGAAAGCAATATTTGAATACGGTTAAGCTG
CCAGAGGCGTTACATGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; Endonuclease/Nucleotidyltransferase; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MPQSLLPNILQFIGQIDPFDKIPKQALRELASNVQITYLGKGDVVDLCESGKEKSLYIIRTGSMEQRKSDGVLRARLGSE
DLFGFTFLDSEVNDEKGYRAIAIENSLLYVIPHSALQALFKAFPSCAEHFASQAQVRLKSALDVVWSNKEKGLFIRKVEE
VASGQVAIVKSEQTIQSVAVEMLHQRSPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLISEVMTHSPVTVKPDDLVL
HAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLIEKIKYAGSVKTMSSFTPERQAIFEALVEGKVAPETVG
KVMTMIMDAYTRRLIQIAIDKLGPPPCDFSWIVAGSHARNEVHMLSDQDSAIVLSDDATDSDRIYFKHLAMMVTNGLASC
DYPLCPGKFMAATPKWCQPLSVWKHYYKKWVANPEYERLLNISVFLEIRTIYGNSEFEGILRDELHSNIRSNREFLSTLV
KDAVNTNPPLGIFNSLVLEKSGENKKTLNVKKYAINLIIDLARIYGLAVECDLSATDERFAAANEKGMLSDDAFKNILGS
YQFILSFRFGHQLEALKNGDVPDNNINPDSFGSFERKHLKDAFRIIADLQEAAKIRFGAR

Sequences:

>Translated_620_residues
MPQSLLPNILQFIGQIDPFDKIPKQALRELASNVQITYLGKGDVVDLCESGKEKSLYIIRTGSMEQRKSDGVLRARLGSE
DLFGFTFLDSEVNDEKGYRAIAIENSLLYVIPHSALQALFKAFPSCAEHFASQAQVRLKSALDVVWSNKEKGLFIRKVEE
VASGQVAIVKSEQTIQSVAVEMLHQRSPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLISEVMTHSPVTVKPDDLVL
HAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLIEKIKYAGSVKTMSSFTPERQAIFEALVEGKVAPETVG
KVMTMIMDAYTRRLIQIAIDKLGPPPCDFSWIVAGSHARNEVHMLSDQDSAIVLSDDATDSDRIYFKHLAMMVTNGLASC
DYPLCPGKFMAATPKWCQPLSVWKHYYKKWVANPEYERLLNISVFLEIRTIYGNSEFEGILRDELHSNIRSNREFLSTLV
KDAVNTNPPLGIFNSLVLEKSGENKKTLNVKKYAINLIIDLARIYGLAVECDLSATDERFAAANEKGMLSDDAFKNILGS
YQFILSFRFGHQLEALKNGDVPDNNINPDSFGSFERKHLKDAFRIIADLQEAAKIRFGAR
>Mature_619_residues
PQSLLPNILQFIGQIDPFDKIPKQALRELASNVQITYLGKGDVVDLCESGKEKSLYIIRTGSMEQRKSDGVLRARLGSED
LFGFTFLDSEVNDEKGYRAIAIENSLLYVIPHSALQALFKAFPSCAEHFASQAQVRLKSALDVVWSNKEKGLFIRKVEEV
ASGQVAIVKSEQTIQSVAVEMLHQRSPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLISEVMTHSPVTVKPDDLVLH
AASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLIEKIKYAGSVKTMSSFTPERQAIFEALVEGKVAPETVGK
VMTMIMDAYTRRLIQIAIDKLGPPPCDFSWIVAGSHARNEVHMLSDQDSAIVLSDDATDSDRIYFKHLAMMVTNGLASCD
YPLCPGKFMAATPKWCQPLSVWKHYYKKWVANPEYERLLNISVFLEIRTIYGNSEFEGILRDELHSNIRSNREFLSTLVK
DAVNTNPPLGIFNSLVLEKSGENKKTLNVKKYAINLIIDLARIYGLAVECDLSATDERFAAANEKGMLSDDAFKNILGSY
QFILSFRFGHQLEALKNGDVPDNNINPDSFGSFERKHLKDAFRIIADLQEAAKIRFGAR

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69314; Mature: 69182

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSLLPNILQFIGQIDPFDKIPKQALRELASNVQITYLGKGDVVDLCESGKEKSLYIIR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCEEEEEE
TGSMEQRKSDGVLRARLGSEDLFGFTFLDSEVNDEKGYRAIAIENSLLYVIPHSALQALF
CCCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEECHHHHHHHH
KAFPSCAEHFASQAQVRLKSALDVVWSNKEKGLFIRKVEEVASGQVAIVKSEQTIQSVAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHH
EMLHQRSPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLISEVMTHSPVTVKPDDLVL
HHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCHHHH
HAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLIEKIKYAGSVKTMSSFTP
HHHHHHHEECCCCCCEEECCCEEEEEEHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHCCC
ERQAIFEALVEGKVAPETVGKVMTMIMDAYTRRLIQIAIDKLGPPPCDFSWIVAGSHARN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
EVHMLSDQDSAIVLSDDATDSDRIYFKHLAMMVTNGLASCDYPLCPGKFMAATPKWCQPL
CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCHH
SVWKHYYKKWVANPEYERLLNISVFLEIRTIYGNSEFEGILRDELHSNIRSNREFLSTLV
HHHHHHHHHHCCCCCHHHHEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHH
KDAVNTNPPLGIFNSLVLEKSGENKKTLNVKKYAINLIIDLARIYGLAVECDLSATDERF
HHHHCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
AAANEKGMLSDDAFKNILGSYQFILSFRFGHQLEALKNGDVPDNNINPDSFGSFERKHLK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
DAFRIIADLQEAAKIRFGAR
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PQSLLPNILQFIGQIDPFDKIPKQALRELASNVQITYLGKGDVVDLCESGKEKSLYIIR
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCEEEEEE
TGSMEQRKSDGVLRARLGSEDLFGFTFLDSEVNDEKGYRAIAIENSLLYVIPHSALQALF
CCCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCEEEEECHHHHHHHH
KAFPSCAEHFASQAQVRLKSALDVVWSNKEKGLFIRKVEEVASGQVAIVKSEQTIQSVAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHH
EMLHQRSPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLISEVMTHSPVTVKPDDLVL
HHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCHHHH
HAASIMMQFNIRNLPVVKENKVVGLLTTSHLVQNHRVQAIFLIEKIKYAGSVKTMSSFTP
HHHHHHHEECCCCCCEEECCCEEEEEEHHHHHHCCCEEEEEEEHHHHHCCCCHHHHHCCC
ERQAIFEALVEGKVAPETVGKVMTMIMDAYTRRLIQIAIDKLGPPPCDFSWIVAGSHARN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
EVHMLSDQDSAIVLSDDATDSDRIYFKHLAMMVTNGLASCDYPLCPGKFMAATPKWCQPL
CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCHH
SVWKHYYKKWVANPEYERLLNISVFLEIRTIYGNSEFEGILRDELHSNIRSNREFLSTLV
HHHHHHHHHHCCCCCHHHHEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHH
KDAVNTNPPLGIFNSLVLEKSGENKKTLNVKKYAINLIIDLARIYGLAVECDLSATDERF
HHHHCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCHHH
AAANEKGMLSDDAFKNILGSYQFILSFRFGHQLEALKNGDVPDNNINPDSFGSFERKHLK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
DAFRIIADLQEAAKIRFGAR
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA