Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is cheV [H]
Identifier: 218709033
GI number: 218709033
Start: 1082405
End: 1083346
Strand: Direct
Name: cheV [H]
Synonym: VS_1039
Alternate gene names: 218709033
Gene position: 1082405-1083346 (Clockwise)
Preceding gene: 218709032
Following gene: 218709038
Centisome position: 32.81
GC content: 41.51
Gene sequence:
>942_bases ATGTCTGGCGTTTTAAATTCTGTTGATCAGAGAACTAAACTCGTCGGTGAAAACCGTCTGGAACTCTTGTTATTTAGCTT AAATAGTCGCCAACTATTTGCGATTAACGTATTTAAAGTGAAAGAAGTCTTAAAAGTGCCTGTACTCACTCGCTTGCCAG GCTCTCACCATCATATTACGGGTGTTGCTTCTTTACGTGGTGAATCTGTACCTGTGATTGACTTACGCAGTGCGATTGGT TTCCCACCATCACGTGATGAGACTCAAGAAAACAACTTGATCATTACCGAATACAACCGAACCGTACAAGGCTTCTTGGT TGGACAAGTTCGTAATATCGTGAATACGACATGGACAGAAATCCAACCGCCACCAAAGACTACGGGTCGAGCAAACTATT TAACTGCTATCACGCATATCCAAGAAGAAGAGCAGCACAAAATCGTTGAGATCATCGATGTTGAAAAGGTGTTAGCGGAG ATCATCGACTACGATGTGTCGATTTCTGACGGTGTTCTAGATCAGCAGTTAGCGAATGAAATGGTTGGCCGTAATGTGCT TATCGTGGATGATTCTTCAACAGCACGCAACCAGATCAAAGGCACCTTGTCGCAACTTGGTTTGAACATTATCGAATGTT GTGACGGCTTAGAAGCACTGACTTTACTTAAGAAGTGGTGTGATGAAGGCAAAGACATCAATCAAGAAATACTATTGATG ATCACCGATGCTGAAATGCCAGAAATGGATGGCTACAAACTGACTCATGAAGTTCGAACTGATCCTCGAATGCATGACTT GTTTATTACGCTAAATACTTCATTAAGTGGTAGTTTCAATGAAGCCATGGTTGAGAAAGTAGGGTGTAATCGCTTTATTT CTAAATTCCAACCAGACCTCTTAGTTGAAGTAACTCAAGAGCGAATGCGTCAGATTTTGTAA
Upstream 100 bases:
>100_bases TTGTTGTACTTAGTTTAAGCATCTGTGTATTTGCGCTTTGCTTTAACCTATCGAATTAGGCTATTGTAGCCACAGTTATT ATTTGTCACTAAGGTGTTGT
Downstream 100 bases:
>100_bases TTAATGCAGCTGTACGGTTTGTTTCGAATGACCTTGGCGAAAACGTTTGCTAGTATTTGATACAGCATGTTTTTTAACAA AATATGCTCAACTACTAACG
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSGVLNSVDQRTKLVGENRLELLLFSLNSRQLFAINVFKVKEVLKVPVLTRLPGSHHHITGVASLRGESVPVIDLRSAIG FPPSRDETQENNLIITEYNRTVQGFLVGQVRNIVNTTWTEIQPPPKTTGRANYLTAITHIQEEEQHKIVEIIDVEKVLAE IIDYDVSISDGVLDQQLANEMVGRNVLIVDDSSTARNQIKGTLSQLGLNIIECCDGLEALTLLKKWCDEGKDINQEILLM ITDAEMPEMDGYKLTHEVRTDPRMHDLFITLNTSLSGSFNEAMVEKVGCNRFISKFQPDLLVEVTQERMRQIL
Sequences:
>Translated_313_residues MSGVLNSVDQRTKLVGENRLELLLFSLNSRQLFAINVFKVKEVLKVPVLTRLPGSHHHITGVASLRGESVPVIDLRSAIG FPPSRDETQENNLIITEYNRTVQGFLVGQVRNIVNTTWTEIQPPPKTTGRANYLTAITHIQEEEQHKIVEIIDVEKVLAE IIDYDVSISDGVLDQQLANEMVGRNVLIVDDSSTARNQIKGTLSQLGLNIIECCDGLEALTLLKKWCDEGKDINQEILLM ITDAEMPEMDGYKLTHEVRTDPRMHDLFITLNTSLSGSFNEAMVEKVGCNRFISKFQPDLLVEVTQERMRQIL >Mature_312_residues SGVLNSVDQRTKLVGENRLELLLFSLNSRQLFAINVFKVKEVLKVPVLTRLPGSHHHITGVASLRGESVPVIDLRSAIGF PPSRDETQENNLIITEYNRTVQGFLVGQVRNIVNTTWTEIQPPPKTTGRANYLTAITHIQEEEQHKIVEIIDVEKVLAEI IDYDVSISDGVLDQQLANEMVGRNVLIVDDSSTARNQIKGTLSQLGLNIIECCDGLEALTLLKKWCDEGKDINQEILLMI TDAEMPEMDGYKLTHEVRTDPRMHDLFITLNTSLSGSFNEAMVEKVGCNRFISKFQPDLLVEVTQERMRQIL
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35233; Mature: 35102
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY ; PS00359 RIBOSOMAL_L11
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVLNSVDQRTKLVGENRLELLLFSLNSRQLFAINVFKVKEVLKVPVLTRLPGSHHHIT CCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCHHHCCCCCCCEEE GVASLRGESVPVIDLRSAIGFPPSRDETQENNLIITEYNRTVQGFLVGQVRNIVNTTWTE EEHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHC IQPPPKTTGRANYLTAITHIQEEEQHKIVEIIDVEKVLAEIIDYDVSISDGVLDQQLANE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH MVGRNVLIVDDSSTARNQIKGTLSQLGLNIIECCDGLEALTLLKKWCDEGKDINQEILLM HHCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE ITDAEMPEMDGYKLTHEVRTDPRMHDLFITLNTSLSGSFNEAMVEKVGCNRFISKFQPDL EECCCCCCCCCEEEEEHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH LVEVTQERMRQIL HHHHHHHHHHHCC >Mature Secondary Structure SGVLNSVDQRTKLVGENRLELLLFSLNSRQLFAINVFKVKEVLKVPVLTRLPGSHHHIT CCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHCCHHHCCCCCCCEEE GVASLRGESVPVIDLRSAIGFPPSRDETQENNLIITEYNRTVQGFLVGQVRNIVNTTWTE EEHHCCCCCCCEEEHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHC IQPPPKTTGRANYLTAITHIQEEEQHKIVEIIDVEKVLAEIIDYDVSISDGVLDQQLANE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH MVGRNVLIVDDSSTARNQIKGTLSQLGLNIIECCDGLEALTLLKKWCDEGKDINQEILLM HHCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE ITDAEMPEMDGYKLTHEVRTDPRMHDLFITLNTSLSGSFNEAMVEKVGCNRFISKFQPDL EECCCCCCCCCEEEEEHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH LVEVTQERMRQIL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]