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The map label for this gene is yjjU [H]

Identifier: 218709030

GI number: 218709030

Start: 1077606

End: 1078808

Strand: Direct

Name: yjjU [H]

Synonym: VS_1036

Alternate gene names: 218709030

Gene position: 1077606-1078808 (Clockwise)

Preceding gene: 218709027

Following gene: 218709032

Centisome position: 32.66

GC content: 42.98

Gene sequence:

>1203_bases
ATGAATAGTGGGATTATAACCAATATTGATACAGCAATAGACTTAGATTATTACGCTAAGTTTATTGCTGGAAAAACAGC
ACTGGTCGCCCAAGGTGGTGGACAGAGAAGTATTTTTACTTCTGGAGTGCTGGATGCCTTTCTTCTTTCTAATTTTGACC
CCTTCGACGAGTTTTTTGGTACCTCTGCAGGTGCTCTTAATTTGTGTGCTTATCTGTGCCGCGATAAAGGCCTTGGCCGT
TCTTTTCTTCTCGACCTTACAACGTCCCCTGAATTCTTCAATCTCTTTTCTTATATACGACACAGAAAGAACCTTGGATT
AGAATGGGCCTTAGAACAAATCATGGCTTACCCATACAAGCTTGATTTGGATTTAGGACGACAAACGCTAGGCGAGCGCC
ATTTCTATGCAGCCGTCACGGATTCTAAAGATTTACGAGATCACTACTTCCCTGTATTGGGTGAAGATTGGTACAAAGTG
ATGATTGCAACCTGTGCGATCCCTCGCTTATACAATGATGAAATCTTTATTGGCGACAATGCTTATGTGGATGGTGGTGT
ATCAGCTTGCATTCCGGTTCAAGAAGCGTGGCGTAGACAAGCCCGTTCCATTGTTGTGATCCGAACTGAGCCAGCGTTAG
AGGAAGAGGTCGAGGTTCAAGCTAACAGTACGCGATTAAAAACACCCAAACCGATATCAGCCGAAGAGCTGGAATGGTTC
CGCGAATCTTTTGACAGTGTTCAAGGCCATTGGCAACAAAAAGTGGAACAGTGGAAAACCGATTGGAGCTCGTTCTTTCA
ACAACAAATTCTCAGCTCAAAAGAACAGAAGCGCGACAGATCACATTTGGATTTACTGAATGGTGGTCGATGGTTATTCG
GGGCGGATGACATCTATAGATTAAGTCATTTAATTGGTGATAAGTTTGATTCCGGCTTAGCAGATATGCTGATGGTGCAT
TACCAAACTTACTCATTGACTCAGGATTTTTTGAACTCCCCACCAGACGATGCTTTTGTAGTGCAAATTGCCCCGAGTAA
GCCGCTGAAATCCAATTCATTAATGAGTAATAAAGAAGATTTACTGCACGATTATGAATTGGGTTTAGAAGCCGGTTACC
GATTTGTTGAAACTTATACCTCTACGAAAAATGCCCGCAGTTCACACATGCCACAGTTGGCAACCATTGCTGCTGAGAAG
TAA

Upstream 100 bases:

>100_bases
TAACGGTTGTCATCTACGCAATCATTCTCTCATTTGGCTTTATTGCAATTGGTAGTTAATACCATTTATTGCGAGGCTGG
GTTTTTATACTCAGGGAATA

Downstream 100 bases:

>100_bases
TGCTTGAGGTTGATTAATAATATTTGAAGTTGATGAGTTAGCATGCTGTGAGCTGATCGTGCTGTTTAAACTGATCGTTA
GTGAGTCGTGTTCTGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNSGIITNIDTAIDLDYYAKFIAGKTALVAQGGGQRSIFTSGVLDAFLLSNFDPFDEFFGTSAGALNLCAYLCRDKGLGR
SFLLDLTTSPEFFNLFSYIRHRKNLGLEWALEQIMAYPYKLDLDLGRQTLGERHFYAAVTDSKDLRDHYFPVLGEDWYKV
MIATCAIPRLYNDEIFIGDNAYVDGGVSACIPVQEAWRRQARSIVVIRTEPALEEEVEVQANSTRLKTPKPISAEELEWF
RESFDSVQGHWQQKVEQWKTDWSSFFQQQILSSKEQKRDRSHLDLLNGGRWLFGADDIYRLSHLIGDKFDSGLADMLMVH
YQTYSLTQDFLNSPPDDAFVVQIAPSKPLKSNSLMSNKEDLLHDYELGLEAGYRFVETYTSTKNARSSHMPQLATIAAEK

Sequences:

>Translated_400_residues
MNSGIITNIDTAIDLDYYAKFIAGKTALVAQGGGQRSIFTSGVLDAFLLSNFDPFDEFFGTSAGALNLCAYLCRDKGLGR
SFLLDLTTSPEFFNLFSYIRHRKNLGLEWALEQIMAYPYKLDLDLGRQTLGERHFYAAVTDSKDLRDHYFPVLGEDWYKV
MIATCAIPRLYNDEIFIGDNAYVDGGVSACIPVQEAWRRQARSIVVIRTEPALEEEVEVQANSTRLKTPKPISAEELEWF
RESFDSVQGHWQQKVEQWKTDWSSFFQQQILSSKEQKRDRSHLDLLNGGRWLFGADDIYRLSHLIGDKFDSGLADMLMVH
YQTYSLTQDFLNSPPDDAFVVQIAPSKPLKSNSLMSNKEDLLHDYELGLEAGYRFVETYTSTKNARSSHMPQLATIAAEK
>Mature_400_residues
MNSGIITNIDTAIDLDYYAKFIAGKTALVAQGGGQRSIFTSGVLDAFLLSNFDPFDEFFGTSAGALNLCAYLCRDKGLGR
SFLLDLTTSPEFFNLFSYIRHRKNLGLEWALEQIMAYPYKLDLDLGRQTLGERHFYAAVTDSKDLRDHYFPVLGEDWYKV
MIATCAIPRLYNDEIFIGDNAYVDGGVSACIPVQEAWRRQARSIVVIRTEPALEEEVEVQANSTRLKTPKPISAEELEWF
RESFDSVQGHWQQKVEQWKTDWSSFFQQQILSSKEQKRDRSHLDLLNGGRWLFGADDIYRLSHLIGDKFDSGLADMLMVH
YQTYSLTQDFLNSPPDDAFVVQIAPSKPLKSNSLMSNKEDLLHDYELGLEAGYRFVETYTSTKNARSSHMPQLATIAAEK

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=359, Percent_Identity=30.6406685236769, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 45497; Mature: 45497

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGIITNIDTAIDLDYYAKFIAGKTALVAQGGGQRSIFTSGVLDAFLLSNFDPFDEFFG
CCCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHC
TSAGALNLCAYLCRDKGLGRSFLLDLTTSPEFFNLFSYIRHRKNLGLEWALEQIMAYPYK
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE
LDLDLGRQTLGERHFYAAVTDSKDLRDHYFPVLGEDWYKVMIATCAIPRLYNDEIFIGDN
EEHHHCHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCC
AYVDGGVSACIPVQEAWRRQARSIVVIRTEPALEEEVEVQANSTRLKTPKPISAEELEWF
CEECCCCCEEECHHHHHHHHHCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCHHHHHHH
RESFDSVQGHWQQKVEQWKTDWSSFFQQQILSSKEQKRDRSHLDLLNGGRWLFGADDIYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
LSHLIGDKFDSGLADMLMVHYQTYSLTQDFLNSPPDDAFVVQIAPSKPLKSNSLMSNKED
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LLHDYELGLEAGYRFVETYTSTKNARSSHMPQLATIAAEK
HHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCHHHHHCCCC
>Mature Secondary Structure
MNSGIITNIDTAIDLDYYAKFIAGKTALVAQGGGQRSIFTSGVLDAFLLSNFDPFDEFFG
CCCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHC
TSAGALNLCAYLCRDKGLGRSFLLDLTTSPEFFNLFSYIRHRKNLGLEWALEQIMAYPYK
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE
LDLDLGRQTLGERHFYAAVTDSKDLRDHYFPVLGEDWYKVMIATCAIPRLYNDEIFIGDN
EEHHHCHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCC
AYVDGGVSACIPVQEAWRRQARSIVVIRTEPALEEEVEVQANSTRLKTPKPISAEELEWF
CEECCCCCEEECHHHHHHHHHCEEEEEECCCCCCHHHHEEECCCCCCCCCCCCHHHHHHH
RESFDSVQGHWQQKVEQWKTDWSSFFQQQILSSKEQKRDRSHLDLLNGGRWLFGADDIYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
LSHLIGDKFDSGLADMLMVHYQTYSLTQDFLNSPPDDAFVVQIAPSKPLKSNSLMSNKED
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LLHDYELGLEAGYRFVETYTSTKNARSSHMPQLATIAAEK
HHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]