Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709027

Identifier: 218709027

GI number: 218709027

Start: 1074213

End: 1074617

Strand: Direct

Name: 218709027

Synonym: VS_1033

Alternate gene names: NA

Gene position: 1074213-1074617 (Clockwise)

Preceding gene: 218709026

Following gene: 218709030

Centisome position: 32.56

GC content: 46.91

Gene sequence:

>405_bases
ATGAAACATCGTTATTTGATCGGCCTTATGTGCTGCAGCGGAGCCGCGTTTGTGCATGCTTCTGAAGCACCAGATTTGGA
AGTTGGATTAGCCATTGACCAAGACCTGAGTGTCGTTGTCGAATTTGATCAGAAATACCGTGCCACGATTGGTAACGACG
GTGCTGCATTTGACTACATTTGGAAGCGTGGTCAGTTTGAGACTGAAGCTCCGTTGAGTTGGTATGTTGGTGCAGGTGCT
TGGGCTGAGTGGAATGATGATTTTGGCTTACGTTTGCCTTTAGGTGTTAAAGTGAATTTCTACGAAGGTTGGAATGCGTA
CGCTCAAGTTCACCCTGAGCTCGACATGTATAAAGGTGTTGAATTACAAGTGGGCGGTGCACTGGGCATCACCTACAAGT
TCTAG

Upstream 100 bases:

>100_bases
CGATACTGAACCTTGAGCGCCAGTTCGCTTTTACCTAGCGATGACACCTCTCTTTGTGAACCCAGTACACTACCATTTTT
AAAAACAGTCTGAGAATATT

Downstream 100 bases:

>100_bases
GTGATGAGACAAAAAAATGCCAGTTTAGTAGCTGGCATTTTTGAATGGTTTAAATAAGGTTATTTCTGTTTGTCCATTGC
ACGCTTTATACAAATTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKHRYLIGLMCCSGAAFVHASEAPDLEVGLAIDQDLSVVVEFDQKYRATIGNDGAAFDYIWKRGQFETEAPLSWYVGAGA
WAEWNDDFGLRLPLGVKVNFYEGWNAYAQVHPELDMYKGVELQVGGALGITYKF

Sequences:

>Translated_134_residues
MKHRYLIGLMCCSGAAFVHASEAPDLEVGLAIDQDLSVVVEFDQKYRATIGNDGAAFDYIWKRGQFETEAPLSWYVGAGA
WAEWNDDFGLRLPLGVKVNFYEGWNAYAQVHPELDMYKGVELQVGGALGITYKF
>Mature_134_residues
MKHRYLIGLMCCSGAAFVHASEAPDLEVGLAIDQDLSVVVEFDQKYRATIGNDGAAFDYIWKRGQFETEAPLSWYVGAGA
WAEWNDDFGLRLPLGVKVNFYEGWNAYAQVHPELDMYKGVELQVGGALGITYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14961; Mature: 14961

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHRYLIGLMCCSGAAFVHASEAPDLEVGLAIDQDLSVVVEFDQKYRATIGNDGAAFDYI
CCCEEEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEE
WKRGQFETEAPLSWYVGAGAWAEWNDDFGLRLPLGVKVNFYEGWNAYAQVHPELDMYKGV
EECCCCCCCCCEEEEECCCCEECCCCCCCEEEECCEEEEEECCCCEEEEECCCCHHHCCE
ELQVGGALGITYKF
EEEECCEEEEEEEC
>Mature Secondary Structure
MKHRYLIGLMCCSGAAFVHASEAPDLEVGLAIDQDLSVVVEFDQKYRATIGNDGAAFDYI
CCCEEEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEE
WKRGQFETEAPLSWYVGAGAWAEWNDDFGLRLPLGVKVNFYEGWNAYAQVHPELDMYKGV
EECCCCCCCCCEEEEECCCCEECCCCCCCEEEECCEEEEEECCCCEEEEECCCCHHHCCE
ELQVGGALGITYKF
EEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA