Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
---|---|
Accession | NC_011753 |
Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is ptsG [H]
Identifier: 218709026
GI number: 218709026
Start: 1072554
End: 1073984
Strand: Direct
Name: ptsG [H]
Synonym: VS_1032
Alternate gene names: 218709026
Gene position: 1072554-1073984 (Clockwise)
Preceding gene: 218709025
Following gene: 218709027
Centisome position: 32.51
GC content: 47.1
Gene sequence:
>1431_bases ATGTTTAAGAACCTTTTTGCTAGCCTGCAGAAAGTTGGTAAGTCTCTGATGCTACCAGTATCAGTTTTACCAGTTGCGGG TATTTTGCTAGGTGTCGGTGCAGCAGACCTTCCTTTCATTCCAGAAATCGTTTCAAACTTAATGGAACAAGCGGGTGGTT CAGTATTCGGTCAAATGGCACTACTGTTCGCAGTGGGCGTAGCACTTGGCTTTACTAATAACGACGGTGTAGCTGGTCTA GCTGCTATCGTTGGTTACGGCATCATGACTGCTACACTAGGCGTAATGGCTGGTGTAATGGGCGTTGATAAAATCGACAC TGGTGTACTAGGTGGTATTCTAGTCGGTGGTGTTGCTGCTTGGGCATTCAACCGTTTCTTCCGTATTCAACTACCAGAGT ACCTTGGCTTCTTCGCTGGTAAGCGTGCTGTGCCAATCATCACAGGTTTCTCTGCGATTGGTCTAGCAATCCTACTATCT GTAGTATGGCCACCAGTTGGCGGCGCTATCTCTGCGTTCTCTGATTGGGCTGCTCACCAAAACCCACAAGTGGCGTTTGG TATCTACGGTATCGTTGAGCGTTCTCTGATTCCATTTGGTCTTCACCACGTTTGGAACGTACCTTTCTTCTTCGAAGCTG GTACTTGTGTAAACGCTGCTGGCGAAACTCAAAACGGTGTTCTTACTTGTTACCTAGTTGCTGATGACGCATCTCGTGCA GCGGGCAATGGCTTCGGTCAGCTAGCTGGTGGTTACATGTTCAAGATGTTCGGTCTACCTGCTGCTGCAATCGCGATTGC ACATTCAGCTAAACCTGAAAACCGCGCTAAAGTAATGGGCATCATGGCTTCTGCTGCGTTGACTTCATTCCTAACGGGTA TCACTGAACCAATCGAATTCTCATTCCTATTCGTTGCTCCTGTACTGTACGCAATCCACGCTCTATTAGCTGGTTCTGCA TACGTTCTTGCGAACACTCTAGGTTTTGTACACGGTACATCTTTCTCACACGGTCTAATCGACTTCCTAGTTCTATCTGG CAACGCGTCTAAGATGGGTCTAATGGTTGTATGTGGTGTTGCTTACGCTGCAATTTACTACATCGTATTCCGCACTGTGA TTAAAGCACTTGACCTTAAAACTCCGGGCCGTGAAGACGAATCTGAAGAAGAAGTAGTTGCTACAGGTTCTGAACTTGCT GGTGAGCTAGTTGCTGCATTCGGTGGTAAAGCGAACATCACTGGTCTTGACGCTTGTATTACTCGTCTACGTGTTGCAGT AGCTGATACCGCTCTTGTTGACCAAGACAAACTGAAGAAACTAGGCGCTGCAGGTGTTGTTGTAGTTGCTGGTGGCGTAC AAGCTATCTTCGGTACTAAGTCTGACAACCTTAAGACAGACATGGATGAGTGGATCCGTAACAACGGTTAA
Upstream 100 bases:
>100_bases GCAATACATGGTTACATTTTCACTGGGTGCTAACATATAGGCTACGGGGGTGTGCCGTTAGGACCCATATAATTATTTTA TCTTTATCAGGAGCATAAAC
Downstream 100 bases:
>100_bases TTCGCTGATTCAATAAATTGAAAGGAGGCCTTACGGCCTCTTTTTTTGTTTTCTACAATATGCAAAATATCCTCACGCTT AAGCTCTTCTTACTCAACTA
Product: PTS system glucose-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIICB-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MFKNLFASLQKVGKSLMLPVSVLPVAGILLGVGAADLPFIPEIVSNLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL AAIVGYGIMTATLGVMAGVMGVDKIDTGVLGGILVGGVAAWAFNRFFRIQLPEYLGFFAGKRAVPIITGFSAIGLAILLS VVWPPVGGAISAFSDWAAHQNPQVAFGIYGIVERSLIPFGLHHVWNVPFFFEAGTCVNAAGETQNGVLTCYLVADDASRA AGNGFGQLAGGYMFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFSFLFVAPVLYAIHALLAGSA YVLANTLGFVHGTSFSHGLIDFLVLSGNASKMGLMVVCGVAYAAIYYIVFRTVIKALDLKTPGREDESEEEVVATGSELA GELVAAFGGKANITGLDACITRLRVAVADTALVDQDKLKKLGAAGVVVVAGGVQAIFGTKSDNLKTDMDEWIRNNG
Sequences:
>Translated_476_residues MFKNLFASLQKVGKSLMLPVSVLPVAGILLGVGAADLPFIPEIVSNLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL AAIVGYGIMTATLGVMAGVMGVDKIDTGVLGGILVGGVAAWAFNRFFRIQLPEYLGFFAGKRAVPIITGFSAIGLAILLS VVWPPVGGAISAFSDWAAHQNPQVAFGIYGIVERSLIPFGLHHVWNVPFFFEAGTCVNAAGETQNGVLTCYLVADDASRA AGNGFGQLAGGYMFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFSFLFVAPVLYAIHALLAGSA YVLANTLGFVHGTSFSHGLIDFLVLSGNASKMGLMVVCGVAYAAIYYIVFRTVIKALDLKTPGREDESEEEVVATGSELA GELVAAFGGKANITGLDACITRLRVAVADTALVDQDKLKKLGAAGVVVVAGGVQAIFGTKSDNLKTDMDEWIRNNG >Mature_476_residues MFKNLFASLQKVGKSLMLPVSVLPVAGILLGVGAADLPFIPEIVSNLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL AAIVGYGIMTATLGVMAGVMGVDKIDTGVLGGILVGGVAAWAFNRFFRIQLPEYLGFFAGKRAVPIITGFSAIGLAILLS VVWPPVGGAISAFSDWAAHQNPQVAFGIYGIVERSLIPFGLHHVWNVPFFFEAGTCVNAAGETQNGVLTCYLVADDASRA AGNGFGQLAGGYMFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFSFLFVAPVLYAIHALLAGSA YVLANTLGFVHGTSFSHGLIDFLVLSGNASKMGLMVVCGVAYAAIYYIVFRTVIKALDLKTPGREDESEEEVVATGSELA GELVAAFGGKANITGLDACITRLRVAVADTALVDQDKLKKLGAAGVVVVAGGVQAIFGTKSDNLKTDMDEWIRNNG
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=484, Percent_Identity=65.2892561983471, Blast_Score=629, Evalue=0.0, Organism=Escherichia coli, GI1786894, Length=480, Percent_Identity=39.7916666666667, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787908, Length=518, Percent_Identity=33.3976833976834, Blast_Score=251, Evalue=9e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 49384; Mature: 49384
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNLFASLQKVGKSLMLPVSVLPVAGILLGVGAADLPFIPEIVSNLMEQAGGSVFGQMA CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH LLFAVGVALGFTNNDGVAGLAAIVGYGIMTATLGVMAGVMGVDKIDTGVLGGILVGGVAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WAFNRFFRIQLPEYLGFFAGKRAVPIITGFSAIGLAILLSVVWPPVGGAISAFSDWAAHQ HHHHHHEEEECHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC NPQVAFGIYGIVERSLIPFGLHHVWNVPFFFEAGTCVNAAGETQNGVLTCYLVADDASRA CCCEEEHHHHHHHHHHCHHHHHHHHCCCEEEECCCEECCCCCCCCCEEEEEEEECCCCHH AGNGFGQLAGGYMFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEF CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH SFLFVAPVLYAIHALLAGSAYVLANTLGFVHGTSFSHGLIDFLVLSGNASKMGLMVVCGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHHHH AYAAIYYIVFRTVIKALDLKTPGREDESEEEVVATGSELAGELVAAFGGKANITGLDACI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHH TRLRVAVADTALVDQDKLKKLGAAGVVVVAGGVQAIFGTKSDNLKTDMDEWIRNNG HHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHEEECCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MFKNLFASLQKVGKSLMLPVSVLPVAGILLGVGAADLPFIPEIVSNLMEQAGGSVFGQMA CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHH LLFAVGVALGFTNNDGVAGLAAIVGYGIMTATLGVMAGVMGVDKIDTGVLGGILVGGVAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH WAFNRFFRIQLPEYLGFFAGKRAVPIITGFSAIGLAILLSVVWPPVGGAISAFSDWAAHQ HHHHHHEEEECHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC NPQVAFGIYGIVERSLIPFGLHHVWNVPFFFEAGTCVNAAGETQNGVLTCYLVADDASRA CCCEEEHHHHHHHHHHCHHHHHHHHCCCEEEECCCEECCCCCCCCCEEEEEEEECCCCHH AGNGFGQLAGGYMFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEF CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH SFLFVAPVLYAIHALLAGSAYVLANTLGFVHGTSFSHGLIDFLVLSGNASKMGLMVVCGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCHHHHHHHHHH AYAAIYYIVFRTVIKALDLKTPGREDESEEEVVATGSELAGELVAAFGGKANITGLDACI HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHH TRLRVAVADTALVDQDKLKKLGAAGVVVVAGGVQAIFGTKSDNLKTDMDEWIRNNG HHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHEEECCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]