Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
---|---|
Accession | NC_011753 |
Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is flgG [H]
Identifier: 218708806
GI number: 218708806
Start: 824094
End: 824882
Strand: Direct
Name: flgG [H]
Synonym: VS_0806
Alternate gene names: 218708806
Gene position: 824094-824882 (Clockwise)
Preceding gene: 218708805
Following gene: 218708807
Centisome position: 24.98
GC content: 45.12
Gene sequence:
>789_bases ATGCATCCAGCATTATGGGTAAGTAAAACCGGTTTAGACGCCCAACAAACCAATATTTCAACAATTTCAAACAACCTTGC CAACGCCTCAACTATTGGTTTTAAAAAGAGCCGTGCGGTGTTTGAAGATTTGTTCTATCAGAATATTAACCAACCAGGTG GCCAATCGTCTCAGAATACTGAGTTGCCAAGTGGTTTGATGTTGGGTGCTGGTTCTAAGGTAGTTGCAACTCAAAAGGTG CACACTCACGGTAACGCACAAACAACGTCGAATAGTCTAGATATGATGATTGAAGGCGACGGTTTCTTCCAAGTTGAGAT GCCAGACGGTGAAACAGGTTACAGCCGTAATGGTCAGTTCACATTGAACGGTGACGGTGCGATCGTAACATCGGGTCAAG GTTATGCCCTACAACCCGAAATCGTTATTCCTGAAGACGCGATCTCGGTAACGGTTGGTAACGATGGTGAGGTGTCGGTT CGTCTACGTGGTCAGCAAGACAACGTTGTGGTAGGTCAAATCACCATTACTGATTTCGTAAACCCAGGTGGTTTAGAGCC CATTGGCCAAAACCTTTACTTGCCTACAGGTGCAAGTGGTGACCCGCAAGAGGGGGTTCCAGGGTTGAACGGCTTAGGTA ATGTTCGTCAGTCTATGCTTGAAGCATCCAATGTAAACGTAACTGAAGAGTTGGTTAACATGATTGAAGCTCAACGTGTA TACGAAATGAACTCAAAAGTTATCTCGGCGGTAGATAAGATGATGAGCTTCGTTAACCAACAACTGTAG
Upstream 100 bases:
>100_bases GTTTGAAATGCAGGTCAAGATGATGAGCACAGCAGAGGAAATGGACAAGTCGTCTGATTCACTGCTTCGTATGAGCTAAT AGAATTTTAAGGAAATTGCT
Downstream 100 bases:
>100_bases CTGGTTAACGAAGCTGTTTACTTATTTCTTTTAATCGTTCTGTTTACTATTGTCTGCTGAGGGTACATCGCCATGAAACG TATTGTTTGTTTAGCTCTGT
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNTELPSGLMLGAGSKVVATQKV HTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQFTLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSV RLRGQQDNVVVGQITITDFVNPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV YEMNSKVISAVDKMMSFVNQQL
Sequences:
>Translated_262_residues MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNTELPSGLMLGAGSKVVATQKV HTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQFTLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSV RLRGQQDNVVVGQITITDFVNPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV YEMNSKVISAVDKMMSFVNQQL >Mature_262_residues MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNTELPSGLMLGAGSKVVATQKV HTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQFTLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSV RLRGQQDNVVVGQITITDFVNPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV YEMNSKVISAVDKMMSFVNQQL
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=55.3846153846154, Blast_Score=294, Evalue=4e-81, Organism=Escherichia coli, GI1787317, Length=260, Percent_Identity=28.4615384615385, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787316, Length=112, Percent_Identity=36.6071428571429, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27880; Mature: 27880
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT CCCCEEEECCCCCHHHCHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF CCCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEE TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGQQDNVVVGQITITDFV EECCCCEEEECCCCEEECCCEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEEECC NPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YEMNSKVISAVDKMMSFVNQQL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT CCCCEEEECCCCCHHHCHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF CCCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEE TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGQQDNVVVGQITITDFV EECCCCEEEECCCCEEECCCEECCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEEEECC NPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YEMNSKVISAVDKMMSFVNQQL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]