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The map label for this gene is flgF [H]

Identifier: 218708805

GI number: 218708805

Start: 823323

End: 824072

Strand: Direct

Name: flgF [H]

Synonym: VS_0805

Alternate gene names: 218708805

Gene position: 823323-824072 (Clockwise)

Preceding gene: 218708804

Following gene: 218708806

Centisome position: 24.95

GC content: 46.8

Gene sequence:

>750_bases
ATGGATCGCGCACTGTTTCTTGCCATGAGTGGCGCTAAGCAAAATATGCAGGCTTTGCAGCTGCGTTCAAACAACCTTGC
CAACGTAAGTACAACGGGTTTTCGTGCTGATTTAGCACAGGCACGTTCAATGCAAGCGTATGGCGAAGGCATGCCTACTC
GTGTTTTCAGCATGACAGAGCGTCCGGGTCATAATTTTGCTCAGGGTAGTGTGGTTACTACTGGCCGAGATCTCGACGTC
ACCATTCAAGGTGATGGTTGGATTTCAGTTATGGACAACACTGGCCGTGAAGGTTTAACCCGTAACGGTAACCTAAGGGT
TGACCAAAACGGTTTACTTACCAACGCAAGCGGCCATTTAGTGCTTGGTGAAAACGACGCACCAATCACGCTCCCAATCC
CAATCAGTAAAGTAGAAATTGGTACTGATGGTACGATTTCGGTGATTCCTCAAGGCGCTCCAGCTGAAGAATTAGCCGTA
GTTGATCGTATTAAGCTTGTGCGTCCAGATAACCAAAGCTTGTTTAAAGATACGAATGGCCTATTCCGTTCGAAAAACCC
AGATCAGGCATACGAAGCAGATGCAGCGGTAACGTTGCTTAAAGGTGCTATCGAAGGCAGTAACGTAAATGCCGTAGGTG
AAATGACCAGCTTAATTGACTTACAACGTCAGTTTGAAATGCAGGTCAAGATGATGAGCACAGCAGAGGAAATGGACAAG
TCGTCTGATTCACTGCTTCGTATGAGCTAA

Upstream 100 bases:

>100_bases
TTTTGTTTTTTTTCATTTAAGCTTTTGATAAATAACAGTTAAAAATATTGGCATAGTGTTTGCTTTATTAGTTCCAGAAA
ATGATTTTTGGAGCAAAATT

Downstream 100 bases:

>100_bases
TAGAATTTTAAGGAAATTGCTATGCATCCAGCATTATGGGTAAGTAAAACCGGTTTAGACGCCCAACAAACCAATATTTC
AACAATTTCAAACAACCTTG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSMQAYGEGMPTRVFSMTERPGHNFAQGSVVTTGRDLDV
TIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASGHLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAV
VDRIKLVRPDNQSLFKDTNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDK
SSDSLLRMS

Sequences:

>Translated_249_residues
MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSMQAYGEGMPTRVFSMTERPGHNFAQGSVVTTGRDLDV
TIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASGHLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAV
VDRIKLVRPDNQSLFKDTNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDK
SSDSLLRMS
>Mature_249_residues
MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSMQAYGEGMPTRVFSMTERPGHNFAQGSVVTTGRDLDV
TIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASGHLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAV
VDRIKLVRPDNQSLFKDTNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDK
SSDSLLRMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=254, Percent_Identity=39.3700787401575, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=30.8270676691729, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26876; Mature: 26876

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSMQAYGEGMPTRVFSMTE
CCCEEEEEECCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECC
RPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASGHL
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCEECCCCEE
VLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAVVDRIKLVRPDNQSLFKDTNG
EECCCCCCEEEECCCEEEEECCCCEEEEEECCCCHHHHHHHHHEEEECCCCHHHHHHCCC
LFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSDSLLRMS
CCCCEEECC
>Mature Secondary Structure
MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSMQAYGEGMPTRVFSMTE
CCCEEEEEECCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECC
RPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASGHL
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCEECCCCEE
VLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAVVDRIKLVRPDNQSLFKDTNG
EECCCCCCEEEECCCEEEEECCCCEEEEEECCCCHHHHHHHHHEEEECCCCHHHHHHCCC
LFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEEMDK
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSDSLLRMS
CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]