Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708700
Identifier: 218708700
GI number: 218708700
Start: 713780
End: 714268
Strand: Direct
Name: 218708700
Synonym: VS_0679
Alternate gene names: NA
Gene position: 713780-714268 (Clockwise)
Preceding gene: 218708697
Following gene: 218708701
Centisome position: 21.63
GC content: 41.31
Gene sequence:
>489_bases ATGAGTCGTAAACGAATGCAAAAAAATCTAGCAAGAAAGAGTAAGATTGATGAGATCGCAAAAGGTCTCTACAGTGGAGC AGAGCAGCGCAACAAACCTAAATTGAGACGTAAGCTCATTGAACGCAGTTTAATGGTTTTAGCTTTGGTGGGTGCGTTTG CCGTCGCTTCCTTGTTCGCCGATGTGTTTTATAGAGTGCAAGATGCGATAACACCTAATAGTCAAATATATGGAACTTGG GTCGAGCAAGATGTCGCTCGTTATGCTGCGGACGAGTTTGTGCTGAGTGAAAATGGTGTGTCAGTGCGAGGCTCTGTTGT GTCGACTCATTTTGATTTTGATGGCAAGTACTTCGAATATAAGGCAGGTAATAAAACGTATCACTTTCGCCTAACGAATT CTGATAAAACAGAAATGATGCTTGTATCGGATAATCACTATAATCCAGTCTTTCGCCTTAAAGGTTATATCGATAACTCA GTTCGATAG
Upstream 100 bases:
>100_bases TTCAAATCTGAACAACAACTTTTTGGAATGAAGCGCAAACTATTCTCATCTAGGCTTCGTTTTATAAACTGTCTCAGTGT ACAATGCGTACAGCATCCTT
Downstream 100 bases:
>100_bases GTTATCTTATACCAATCGTAGTAAATAACTGGTCACCCTAGCTTGTTAAAAAACTCGATAACTTCGTTAGAATTTTTGAT TGTAGAATAACTACTTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTW VEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNS VR
Sequences:
>Translated_162_residues MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTW VEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNS VR >Mature_161_residues SRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTWV EQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSV R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18473
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFA CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVFYRVQDAITPNSQIYGTWVEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEY HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCEEECEEEEEEECCCCCEEEE KAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSVR ECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCC >Mature Secondary Structure SRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFA CHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVFYRVQDAITPNSQIYGTWVEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEY HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCEEECEEEEEEECCCCCEEEE KAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSVR ECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA