Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708700

Identifier: 218708700

GI number: 218708700

Start: 713780

End: 714268

Strand: Direct

Name: 218708700

Synonym: VS_0679

Alternate gene names: NA

Gene position: 713780-714268 (Clockwise)

Preceding gene: 218708697

Following gene: 218708701

Centisome position: 21.63

GC content: 41.31

Gene sequence:

>489_bases
ATGAGTCGTAAACGAATGCAAAAAAATCTAGCAAGAAAGAGTAAGATTGATGAGATCGCAAAAGGTCTCTACAGTGGAGC
AGAGCAGCGCAACAAACCTAAATTGAGACGTAAGCTCATTGAACGCAGTTTAATGGTTTTAGCTTTGGTGGGTGCGTTTG
CCGTCGCTTCCTTGTTCGCCGATGTGTTTTATAGAGTGCAAGATGCGATAACACCTAATAGTCAAATATATGGAACTTGG
GTCGAGCAAGATGTCGCTCGTTATGCTGCGGACGAGTTTGTGCTGAGTGAAAATGGTGTGTCAGTGCGAGGCTCTGTTGT
GTCGACTCATTTTGATTTTGATGGCAAGTACTTCGAATATAAGGCAGGTAATAAAACGTATCACTTTCGCCTAACGAATT
CTGATAAAACAGAAATGATGCTTGTATCGGATAATCACTATAATCCAGTCTTTCGCCTTAAAGGTTATATCGATAACTCA
GTTCGATAG

Upstream 100 bases:

>100_bases
TTCAAATCTGAACAACAACTTTTTGGAATGAAGCGCAAACTATTCTCATCTAGGCTTCGTTTTATAAACTGTCTCAGTGT
ACAATGCGTACAGCATCCTT

Downstream 100 bases:

>100_bases
GTTATCTTATACCAATCGTAGTAAATAACTGGTCACCCTAGCTTGTTAAAAAACTCGATAACTTCGTTAGAATTTTTGAT
TGTAGAATAACTACTTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTW
VEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNS
VR

Sequences:

>Translated_162_residues
MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTW
VEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNS
VR
>Mature_161_residues
SRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFADVFYRVQDAITPNSQIYGTWV
EQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEYKAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSV
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18604; Mature: 18473

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFA
CCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVFYRVQDAITPNSQIYGTWVEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEY
HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCEEECEEEEEEECCCCCEEEE
KAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSVR
ECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SRKRMQKNLARKSKIDEIAKGLYSGAEQRNKPKLRRKLIERSLMVLALVGAFAVASLFA
CHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVFYRVQDAITPNSQIYGTWVEQDVARYAADEFVLSENGVSVRGSVVSTHFDFDGKYFEY
HHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHEECCCCCEEECEEEEEEECCCCCEEEE
KAGNKTYHFRLTNSDKTEMMLVSDNHYNPVFRLKGYIDNSVR
ECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA