| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708668
Identifier: 218708668
GI number: 218708668
Start: 672932
End: 673075
Strand: Reverse
Name: 218708668
Synonym: VS_0647
Alternate gene names: NA
Gene position: 673075-672932 (Counterclockwise)
Preceding gene: 218708669
Following gene: 218708667
Centisome position: 20.4
GC content: 36.81
Gene sequence:
>144_bases TTGGGAATCTACTGCGGTTTCAGTGATCTACAGACAACCTCAATTCTGAGATCTGTCGCAAAAAAATTTTACCCACCGAC TTTACTGTATAAAGAAACAGTATATACTGGGCTTATATACAGTGTTGTTCAGTTATACAGGTAA
Upstream 100 bases:
>100_bases CGACGTTCGTCAGCCTTTTTTATTGCCCATAGAAAGCCGTAGGCTCTCGCTTCTCTGCAATTCCTTATACCTCCACTCCC GACAGGGAGGAACAACTGAG
Downstream 100 bases:
>100_bases ATAAAAATGCTGGCTCATCTAAGTGTTAATAATTTCGCTATTGTTAAGTCTTTACAGCTAGAACTCTCTAAAGGCATGAC AACAATCACCGGAGAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MGIYCGFSDLQTTSILRSVAKKFYPPTLLYKETVYTGLIYSVVQLYR
Sequences:
>Translated_47_residues MGIYCGFSDLQTTSILRSVAKKFYPPTLLYKETVYTGLIYSVVQLYR >Mature_46_residues GIYCGFSDLQTTSILRSVAKKFYPPTLLYKETVYTGLIYSVVQLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5428; Mature: 5297
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYCGFSDLQTTSILRSVAKKFYPPTLLYKETVYTGLIYSVVQLYR CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GIYCGFSDLQTTSILRSVAKKFYPPTLLYKETVYTGLIYSVVQLYR CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA