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The map label for this gene is recN [H]

Identifier: 218708667

GI number: 218708667

Start: 671261

End: 672925

Strand: Reverse

Name: recN [H]

Synonym: VS_0646

Alternate gene names: 218708667

Gene position: 672925-671261 (Counterclockwise)

Preceding gene: 218708668

Following gene: 218708666

Centisome position: 20.4

GC content: 44.8

Gene sequence:

>1665_bases
ATGCTGGCTCATCTAAGTGTTAATAATTTCGCTATTGTTAAGTCTTTACAGCTAGAACTCTCTAAAGGCATGACAACAAT
CACCGGAGAAACTGGTGCGGGTAAATCTATCGCTATCGACGCTTTAGGCTTGTGTCTTGGAGGAAGATCTGATGCAGGAA
TGGTTCGACAAGGTGAAGAAAAAACCGAAGTCAGTGCCGCTTTTTTACTTGAGAACAATCTGCATGCTACCCGCTGGTTA
GAAGACAATGAACTGCTTGATGGCGGTGAATGCATCCTACGCAGAACCATCTCTAAAGAAGGTCGCTCTCGCGCATTCAT
CAACGGCAGTCCCGTGCCTCTTTCACAATTAAAATCGCTTGGACAGCTGTTGATCAACATTCATGGTCAGCACGCGCACC
ATCAGTTGATGAAAAGCGATTACCAAATGGCCATGCTTGATCAATACGCAGGTCACTTGAACCTATTGAAATCGACACGT
AATGCTTACCAAGCCTGGCGACAAGCCGATAACCACTTGAAAGAGTTACGTGAAAATAGCCAGCAAAACCAAGCTCAAAA
ACAACTTCTTGAATACCAAATCAAAGAGTTAAATGAGCTGTCTATTGGGGAGGAAGAATATGAAGACCTCGAACAAGAGC
ATAAGCGCCTCTCCAATAGCGGAGAACTGGCCACAACCTGCCAACAAGCTATCGAGCTTATTTTTGAAGGCGAAGAAGTT
AATGCGCTTGGTATTCTGCAATCGGCCAATAACTCCTTAATTCAGTTAGCGGAGCTAGATGAAAGATTGGCTGAGTTACC
AAACTTATTGTCTGAAGCCATTATTCAGATAGAAGAAACCAACAACGAGTTAAGAACATACCTAGACAGCATTGATGTTG
ATCCCGGTCGTATGGCTTACGTTGAGGAGCGTTTCTCAAAAGTAATGTCGATGTCTCGTAAACATCACGTGTTGCCAGAA
GAGCTCTATAAGCATCATCAAGACTTATTACAACAAGTTGAAGCGCTTGATTGCTCTGATGAAAAATTGGAAGAATTGGC
CAACGAGGTAGAAAACCAATACCAATCGTTCGTTGCTAAATCAGAGAAGCTTAATAAATCTCGAACTCGTTACGCAAAAG
AACTCAACAAGCTGATCACGCAAAGCATGCACGAACTGAGCATGGAAAAAGCGCAGTTTGCCATTGAAGTGAACAACACC
AACACACACCCTTCTCCATTGGGTATGGATAACGTGACCTTCATTGTTTCGACCAACCCAGGCCAACCAATGCAGCCCAT
TGCTAAAGTGGCCTCTGGGGGCGAGTTATCACGAATTTCATTAGCGATTCAGGTGATCACAGCGCAAAAAGTGGATACAC
CAAGCCTGATTTTCGATGAAGTCGATGTGGGAATCAGTGGACCAACTGCTGCGGTTGTCGGAAAAATGCTACGTAAGCTG
GGTGAATCTACGCAGGTGATGTGTGTGACGCACTTACCTCAAGTTGCCGGTTGCGGCCACCAACAGCTGTTTGTAGCGAA
GAACACGAAATCAGGTAAAACCGAGACTCAAATGCACACGCTTGATGAACAACAACGCGTTTCAGAGCTTGCTCGACTGC
TTGGTGGCAGCCAAATTACCGAATCGACGCTTGCCAATGCAAAAGAGTTATTAATCGCAGCATAG

Upstream 100 bases:

>100_bases
ATCTGTCGCAAAAAAATTTTACCCACCGACTTTACTGTATAAAGAAACAGTATATACTGGGCTTATATACAGTGTTGTTC
AGTTATACAGGTAAATAAAA

Downstream 100 bases:

>100_bases
GTTACATATTCAGCAACTTTCTGATAATTTACCGAAAATTCTTGGCAATTTTGCAACTTAATTCAAAATTGCCAGTCATA
ACAAGCTCAAAGCGCAAGGA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRSDAGMVRQGEEKTEVSAAFLLENNLHATRWL
EDNELLDGGECILRRTISKEGRSRAFINGSPVPLSQLKSLGQLLINIHGQHAHHQLMKSDYQMAMLDQYAGHLNLLKSTR
NAYQAWRQADNHLKELRENSQQNQAQKQLLEYQIKELNELSIGEEEYEDLEQEHKRLSNSGELATTCQQAIELIFEGEEV
NALGILQSANNSLIQLAELDERLAELPNLLSEAIIQIEETNNELRTYLDSIDVDPGRMAYVEERFSKVMSMSRKHHVLPE
ELYKHHQDLLQQVEALDCSDEKLEELANEVENQYQSFVAKSEKLNKSRTRYAKELNKLITQSMHELSMEKAQFAIEVNNT
NTHPSPLGMDNVTFIVSTNPGQPMQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQLFVAKNTKSGKTETQMHTLDEQQRVSELARLLGGSQITESTLANAKELLIAA

Sequences:

>Translated_554_residues
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRSDAGMVRQGEEKTEVSAAFLLENNLHATRWL
EDNELLDGGECILRRTISKEGRSRAFINGSPVPLSQLKSLGQLLINIHGQHAHHQLMKSDYQMAMLDQYAGHLNLLKSTR
NAYQAWRQADNHLKELRENSQQNQAQKQLLEYQIKELNELSIGEEEYEDLEQEHKRLSNSGELATTCQQAIELIFEGEEV
NALGILQSANNSLIQLAELDERLAELPNLLSEAIIQIEETNNELRTYLDSIDVDPGRMAYVEERFSKVMSMSRKHHVLPE
ELYKHHQDLLQQVEALDCSDEKLEELANEVENQYQSFVAKSEKLNKSRTRYAKELNKLITQSMHELSMEKAQFAIEVNNT
NTHPSPLGMDNVTFIVSTNPGQPMQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQLFVAKNTKSGKTETQMHTLDEQQRVSELARLLGGSQITESTLANAKELLIAA
>Mature_554_residues
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRSDAGMVRQGEEKTEVSAAFLLENNLHATRWL
EDNELLDGGECILRRTISKEGRSRAFINGSPVPLSQLKSLGQLLINIHGQHAHHQLMKSDYQMAMLDQYAGHLNLLKSTR
NAYQAWRQADNHLKELRENSQQNQAQKQLLEYQIKELNELSIGEEEYEDLEQEHKRLSNSGELATTCQQAIELIFEGEEV
NALGILQSANNSLIQLAELDERLAELPNLLSEAIIQIEETNNELRTYLDSIDVDPGRMAYVEERFSKVMSMSRKHHVLPE
ELYKHHQDLLQQVEALDCSDEKLEELANEVENQYQSFVAKSEKLNKSRTRYAKELNKLITQSMHELSMEKAQFAIEVNNT
NTHPSPLGMDNVTFIVSTNPGQPMQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
GESTQVMCVTHLPQVAGCGHQQLFVAKNTKSGKTETQMHTLDEQQRVSELARLLGGSQITESTLANAKELLIAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=55.3345388788427, Blast_Score=612, Evalue=1e-176,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61523; Mature: 61523

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRSDAGMVRQGEE
CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCH
KTEVSAAFLLENNLHATRWLEDNELLDGGECILRRTISKEGRSRAFINGSPVPLSQLKSL
HHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
GQLLINIHGQHAHHQLMKSDYQMAMLDQYAGHLNLLKSTRNAYQAWRQADNHLKELRENS
HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNQAQKQLLEYQIKELNELSIGEEEYEDLEQEHKRLSNSGELATTCQQAIELIFEGEEV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
NALGILQSANNSLIQLAELDERLAELPNLLSEAIIQIEETNNELRTYLDSIDVDPGRMAY
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VEERFSKVMSMSRKHHVLPEELYKHHQDLLQQVEALDCSDEKLEELANEVENQYQSFVAK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SEKLNKSRTRYAKELNKLITQSMHELSMEKAQFAIEVNNTNTHPSPLGMDNVTFIVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCC
GQPMQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
CCCHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHQQLFVAKNTKSGKTETQMHTLDEQQRVSELARLLGGSQIT
CCCCEEEEEECCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ESTLANAKELLIAA
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRSDAGMVRQGEE
CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCH
KTEVSAAFLLENNLHATRWLEDNELLDGGECILRRTISKEGRSRAFINGSPVPLSQLKSL
HHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
GQLLINIHGQHAHHQLMKSDYQMAMLDQYAGHLNLLKSTRNAYQAWRQADNHLKELRENS
HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQNQAQKQLLEYQIKELNELSIGEEEYEDLEQEHKRLSNSGELATTCQQAIELIFEGEEV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
NALGILQSANNSLIQLAELDERLAELPNLLSEAIIQIEETNNELRTYLDSIDVDPGRMAY
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VEERFSKVMSMSRKHHVLPEELYKHHQDLLQQVEALDCSDEKLEELANEVENQYQSFVAK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SEKLNKSRTRYAKELNKLITQSMHELSMEKAQFAIEVNNTNTHPSPLGMDNVTFIVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCC
GQPMQPIAKVASGGELSRISLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKMLRKL
CCCHHHHHHHHCCCCCHHHHHEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHQQLFVAKNTKSGKTETQMHTLDEQQRVSELARLLGGSQIT
CCCCEEEEEECCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ESTLANAKELLIAA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA