Click here to switch to the map view.

The map label for this gene is 218708658

Identifier: 218708658

GI number: 218708658

Start: 662730

End: 663668

Strand: Reverse

Name: 218708658

Synonym: VS_0636

Alternate gene names: NA

Gene position: 663668-662730 (Counterclockwise)

Preceding gene: 218708663

Following gene: 218708657

Centisome position: 20.12

GC content: 46.11

Gene sequence:

>939_bases
ATGACCACATACTCACACATAGATACCCCGTTCAACCTGCGCCACACCTGTTGGTTTTGTGGTGAACCTTCCAATGATAT
TGTTGAATTCCCTAAGACTGCACAAGCTATTGCCAAGATAGACTATTCACCGATAGCACTGCCGGCTTGCAAGGAGTGTG
CGAGAATTAACTATTCCAAGAGTCTGACTTCAATTTGGGCGGTGCGCGATCAGATAAAACACACTCTCATAGACAAGTAC
GCTAAGCACCTTGGCATCGGTGAGAACTGGACGGAGCAAGAGCTGATCGATTCTGATTTCTCGGGCTCGACGCTTGGCGG
GTTTGGCCGTAGTGCTTGGAAGATGTATCAAATAGCCAAACAACGAGTCGATTATAGAGGCTGGCCTTTGTCGGTTGATG
ACATCCCACTTGAGGTATACGACGAAACCAGTGGCTTTGAGTTTGACGGTACTCGTTACGCATCAATCAATTCATGTATC
GACTATTTCACCAAGGCTGCGGGCGTAGACAAAGAGCTGTTGTCGCAGCTTGTCGACATTGTTTCAACAGACCGTTTTAG
CTACGCACTTCGAATCGCCAAGCTGAACAAGAATGTCTCTAATACCAAACGCTCAGAGATCGTCGAAGAGGTGTTACAGC
AAGAGTCTGAACAAGAAGAGATACTGCTTGAACAAGCCAACTCACTGTTCAACCCGAATGTCGAAGAAGTGAGTATCTCT
GGCTCAATAGCGCCTGTATTTGCCATTCAATGGGCAATGATGAATAACGTTAAAGATTTAGCTCACCTTTGCGCGCTCGA
GGATGATTATTTTGACTATTTCGAACATCTTGGTGGCCCTGCGGCTTTCATGTCTTATAACGGCCTACAGCTCTATTTAG
AATCACGCCAAGATCCGGAATGGGTAGAAAAGTCGGATCCAAATAAACAGTATTGGTGA

Upstream 100 bases:

>100_bases
ATAGTCAGAACATCCAATAACAACGTGCAAGGACAAGTCTGAACAGGGATAATTGTTTTGATAATTAAACCAACCTCAAG
TACCTAGCTGATAAAGACTA

Downstream 100 bases:

>100_bases
ACATGCCTACCTACTGGTGAACACGTGTAAGCTCGATAACTGCATCAAACACCCATTGTTAGTCCTTGTTTTATATAAAG
ATCTAAAAGTAGCCCCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTTYSHIDTPFNLRHTCWFCGEPSNDIVEFPKTAQAIAKIDYSPIALPACKECARINYSKSLTSIWAVRDQIKHTLIDKY
AKHLGIGENWTEQELIDSDFSGSTLGGFGRSAWKMYQIAKQRVDYRGWPLSVDDIPLEVYDETSGFEFDGTRYASINSCI
DYFTKAAGVDKELLSQLVDIVSTDRFSYALRIAKLNKNVSNTKRSEIVEEVLQQESEQEEILLEQANSLFNPNVEEVSIS
GSIAPVFAIQWAMMNNVKDLAHLCALEDDYFDYFEHLGGPAAFMSYNGLQLYLESRQDPEWVEKSDPNKQYW

Sequences:

>Translated_312_residues
MTTYSHIDTPFNLRHTCWFCGEPSNDIVEFPKTAQAIAKIDYSPIALPACKECARINYSKSLTSIWAVRDQIKHTLIDKY
AKHLGIGENWTEQELIDSDFSGSTLGGFGRSAWKMYQIAKQRVDYRGWPLSVDDIPLEVYDETSGFEFDGTRYASINSCI
DYFTKAAGVDKELLSQLVDIVSTDRFSYALRIAKLNKNVSNTKRSEIVEEVLQQESEQEEILLEQANSLFNPNVEEVSIS
GSIAPVFAIQWAMMNNVKDLAHLCALEDDYFDYFEHLGGPAAFMSYNGLQLYLESRQDPEWVEKSDPNKQYW
>Mature_311_residues
TTYSHIDTPFNLRHTCWFCGEPSNDIVEFPKTAQAIAKIDYSPIALPACKECARINYSKSLTSIWAVRDQIKHTLIDKYA
KHLGIGENWTEQELIDSDFSGSTLGGFGRSAWKMYQIAKQRVDYRGWPLSVDDIPLEVYDETSGFEFDGTRYASINSCID
YFTKAAGVDKELLSQLVDIVSTDRFSYALRIAKLNKNVSNTKRSEIVEEVLQQESEQEEILLEQANSLFNPNVEEVSISG
SIAPVFAIQWAMMNNVKDLAHLCALEDDYFDYFEHLGGPAAFMSYNGLQLYLESRQDPEWVEKSDPNKQYW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35603; Mature: 35472

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYSHIDTPFNLRHTCWFCGEPSNDIVEFPKTAQAIAKIDYSPIALPACKECARINYSK
CCCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHH
SLTSIWAVRDQIKHTLIDKYAKHLGIGENWTEQELIDSDFSGSTLGGFGRSAWKMYQIAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
QRVDYRGWPLSVDDIPLEVYDETSGFEFDGTRYASINSCIDYFTKAAGVDKELLSQLVDI
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VSTDRFSYALRIAKLNKNVSNTKRSEIVEEVLQQESEQEEILLEQANSLFNPNVEEVSIS
HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEC
GSIAPVFAIQWAMMNNVKDLAHLCALEDDYFDYFEHLGGPAAFMSYNGLQLYLESRQDPE
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCC
WVEKSDPNKQYW
HHHCCCCCCCCC
>Mature Secondary Structure 
TTYSHIDTPFNLRHTCWFCGEPSNDIVEFPKTAQAIAKIDYSPIALPACKECARINYSK
CCCCCCCCCCCCCEEEEECCCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHH
SLTSIWAVRDQIKHTLIDKYAKHLGIGENWTEQELIDSDFSGSTLGGFGRSAWKMYQIAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
QRVDYRGWPLSVDDIPLEVYDETSGFEFDGTRYASINSCIDYFTKAAGVDKELLSQLVDI
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VSTDRFSYALRIAKLNKNVSNTKRSEIVEEVLQQESEQEEILLEQANSLFNPNVEEVSIS
HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEC
GSIAPVFAIQWAMMNNVKDLAHLCALEDDYFDYFEHLGGPAAFMSYNGLQLYLESRQDPE
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCC
WVEKSDPNKQYW
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA