| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is apaH [H]
Identifier: 218708406
GI number: 218708406
Start: 366785
End: 367588
Strand: Reverse
Name: apaH [H]
Synonym: VS_0368
Alternate gene names: 218708406
Gene position: 367588-366785 (Counterclockwise)
Preceding gene: 218708407
Following gene: 218708400
Centisome position: 11.14
GC content: 44.9
Gene sequence:
>804_bases GTGTCGAATTATATTGTCGGAGACATTCAAGGATGCTTCGACGAGCTTAAGTTACTGCTTGAAACCATCAACTTTGATAA ACAACAAGATACTTTATGGGTCGCCGGAGACTTAGTTGCTCGTGGCCCTAAATCCTTAGAGACGTTACGTTTTGTTCGTA ACCTTGACAGTTCAGCGAAGGTGGTATTGGGTAACCATGATTTACATCTACTTGCTGTATCCTTAGGCCTCTTTTCAGCC AAACCAAAAGACAAGACTCAACCAATTCTTGATGCTGAAGACCGTGACCAATTGCTGGAATGGTTAAGACAACAACCCTT GATGCAAGAGCACCCAGAGTTTGTCATGACACATGCAGGCATCTCACCTCAATGGGACTTAGAACAAGCACGTACAGAGA GTCGAGAGATAACGTCATTACTGAAATCGGACCGTTGGCAGTGGCTTATTGAGAACATGTACAGCAACACGCCAGATCTT TGGAGCAACAAGTTACAAGACATCGAACGTTATCGCTATGCGATCAATAGCCTGACAAGAATGCGCTTCTGTTTTGAAGA TGGCCGACTCGACATGGCATGTAAGCTACCACCGAATGAAATTACCGATGAACCACTAGTGCCATGGTTTGACCTTCCGC AACGCATAAAGCTCGATAAAACCGTTGTTTTTGGACACTGGGCTGCGCTTGAAGGCTATAACGGAAAAGATGTAATTGGA CTTGATACTGGGTGTGTGTGGGGGGGAGACTTGACGATACTTCGCTGGGAAGACAAACAGTTTTTCACTCAAAAAGCGCT ATAG
Upstream 100 bases:
>100_bases CATAAAGGCATTGATTTCATAACAGAAGTCGACCCATTTAGACTGGCTATCCCCAATATCCTTAACTAGTACGCATCTCT ACCACTTACAGGAAAATACT
Downstream 100 bases:
>100_bases AAACACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGATACGAGA TACGAGATACGAGATACGAG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSNYIVGDIQGCFDELKLLLETINFDKQQDTLWVAGDLVARGPKSLETLRFVRNLDSSAKVVLGNHDLHLLAVSLGLFSA KPKDKTQPILDAEDRDQLLEWLRQQPLMQEHPEFVMTHAGISPQWDLEQARTESREITSLLKSDRWQWLIENMYSNTPDL WSNKLQDIERYRYAINSLTRMRFCFEDGRLDMACKLPPNEITDEPLVPWFDLPQRIKLDKTVVFGHWAALEGYNGKDVIG LDTGCVWGGDLTILRWEDKQFFTQKAL
Sequences:
>Translated_267_residues MSNYIVGDIQGCFDELKLLLETINFDKQQDTLWVAGDLVARGPKSLETLRFVRNLDSSAKVVLGNHDLHLLAVSLGLFSA KPKDKTQPILDAEDRDQLLEWLRQQPLMQEHPEFVMTHAGISPQWDLEQARTESREITSLLKSDRWQWLIENMYSNTPDL WSNKLQDIERYRYAINSLTRMRFCFEDGRLDMACKLPPNEITDEPLVPWFDLPQRIKLDKTVVFGHWAALEGYNGKDVIG LDTGCVWGGDLTILRWEDKQFFTQKAL >Mature_266_residues SNYIVGDIQGCFDELKLLLETINFDKQQDTLWVAGDLVARGPKSLETLRFVRNLDSSAKVVLGNHDLHLLAVSLGLFSAK PKDKTQPILDAEDRDQLLEWLRQQPLMQEHPEFVMTHAGISPQWDLEQARTESREITSLLKSDRWQWLIENMYSNTPDLW SNKLQDIERYRYAINSLTRMRFCFEDGRLDMACKLPPNEITDEPLVPWFDLPQRIKLDKTVVFGHWAALEGYNGKDVIGL DTGCVWGGDLTILRWEDKQFFTQKAL
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=269, Percent_Identity=50.1858736059479, Blast_Score=292, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 30926; Mature: 30794
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYIVGDIQGCFDELKLLLETINFDKQQDTLWVAGDLVARGPKSLETLRFVRNLDSSAK CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCCCCCE VVLGNHDLHLLAVSLGLFSAKPKDKTQPILDAEDRDQLLEWLRQQPLMQEHPEFVMTHAG EEECCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEECC ISPQWDLEQARTESREITSLLKSDRWQWLIENMYSNTPDLWSNKLQDIERYRYAINSLTR CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MRFCFEDGRLDMACKLPPNEITDEPLVPWFDLPQRIKLDKTVVFGHWAALEGYNGKDVIG HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEHHEECCCCCCEEEE LDTGCVWGGDLTILRWEDKQFFTQKAL ECCCEEECCCEEEEEECCHHHHHHHCC >Mature Secondary Structure SNYIVGDIQGCFDELKLLLETINFDKQQDTLWVAGDLVARGPKSLETLRFVRNLDSSAK CCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCHHHHHHHHHHCCCCCCE VVLGNHDLHLLAVSLGLFSAKPKDKTQPILDAEDRDQLLEWLRQQPLMQEHPEFVMTHAG EEECCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEECC ISPQWDLEQARTESREITSLLKSDRWQWLIENMYSNTPDLWSNKLQDIERYRYAINSLTR CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MRFCFEDGRLDMACKLPPNEITDEPLVPWFDLPQRIKLDKTVVFGHWAALEGYNGKDVIG HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEHHEECCCCCCEEEE LDTGCVWGGDLTILRWEDKQFFTQKAL ECCCEEECCCEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA