Click here to switch to the map view.

The map label for this gene is yhjX

Identifier: 218697264

GI number: 218697264

Start: 4082782

End: 4084029

Strand: Reverse

Name: yhjX

Synonym: EC55989_4003

Alternate gene names: 218697264

Gene position: 4084029-4082782 (Counterclockwise)

Preceding gene: 218697265

Following gene: 218697263

Centisome position: 79.23

GC content: 50.88

Gene sequence:

>1248_bases
TTGTCGGCAGAGATTTTTCCTTTTTATTACTGCAGGAATACTGCCATGACACCTTCAAATTATCAGCGTACCCGCTGGCT
GACACTCATCGGTACAATCATTACCCAGTTTGCGCTGGGGTCGGTTTATACCTGGAGCCTGTTTAATGGCGCGCTTTCCG
CCAAGCTGGATGCGCCGGTAAGCCAGGTCGCTTTCTCTTTCGGCTTGTTAAGTCTGGGGCTGGCAATTTCATCTTCTGTT
GCGGGCAAATTACAGGAACGTTTTGGCGTTAAACGCGTCACCATGGCTTCCGGCATTTTGCTGGGATTAGGCTTCTTCCT
GACCGCGCATTCTGACAACCTGATGATGCTGTGGTTAAGCGCCGGTGTGCTGGTCGGTCTGGCGGATGGCGCGGGTTACC
TGCTGACGCTCTCTAACTGCGTGAAGTGGTTCCCGGAGCGTAAAGGTCTGATATCCGCGTTCGCTATCGGTTCTTATGGT
CTGGGTAGCCTGGGTTTCAAATTTATCGACACGCGGCTGCTGGAAACGGTGGGTCTGGAAAAAACCTTTGTGATTTGGGG
AGCGATTGCGCTGGTGATGATTGTTTTCGGCGCAACGTTAATGAAAGACGCACCAAAACAGGAAGTGAAAACCAGCAATG
GTGTGGTGGAGAAAGATTACACGCTGGCAGAGTCGATGCGTAAACCGCAGTACTGGATGTTAGCGGTAATGTTCCTGACT
GCCTGCATGAGCGGCCTGTACGTGATTGGGGTAGCGAAAGATATCGCCCAAAGTCTGGCACACCTTGATGTGGTTTCCGC
AGCTAATGCAGTCACTGTTATTTCCATCGCCAACCTTTCAGGTCGTCTGGTTCTGGGGATACTGTCTGACAAAATCGCCC
GTATCCGTGTTATCACCATTGGTCAGGTGATTTCGCTAGTGGGTATGGCGGCCCTGCTGTTTGCACCACTGAATGCAGTG
ACGTTCTTTGCAGCGATTGCCTGCGTGGCATTTAACTTTGGCGGCACTATTACCGTCTTTCCGTCACTGGTCAGTGAGTT
CTTCGGCCTCAATAACCTGGCGAAAAACTACGGTGTGATTTACCTCGGTTTCGGTATCGGTAGCATTTTTGGTTCGATTA
TCGCCTCACTGTTTGGCGGTTTCTATGTGACCTTCTACGTGATTTTCGCCCTGCTGATTCTGTCATTGGCGCTTTCTACG
ACGATTCGTCAGCCAGAGCAGAAAATGTTGCGTGAGGCGCATATTTAG

Upstream 100 bases:

>100_bases
ATAATTGTCGCGTCATTCATTCCTGAACTAAGGCATTTCATTCCGTTCTGATGGCATTTCATGCCGTTTTTCCCCAGGCA
TAAAGTGCACTTCGTTATGG

Downstream 100 bases:

>100_bases
AAATATGTTGCTACTGAAATAAATACGAGTAGGGAGACTTCAAAGTCTCCCTTTTTTATGGACGCATATTAAAAGAACAA
TAATATTCATACCACAAATA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSAEIFPFYYCRNTAMTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSV
AGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYG
LGSLGFKFIDTRLLETVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLT
ACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAV
TFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALST
TIRQPEQKMLREAHI

Sequences:

>Translated_415_residues
MSAEIFPFYYCRNTAMTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSV
AGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYG
LGSLGFKFIDTRLLETVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLT
ACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAV
TFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALST
TIRQPEQKMLREAHI
>Mature_414_residues
SAEIFPFYYCRNTAMTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVA
GKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGL
GSLGFKFIDTRLLETVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTA
CMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVT
FFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTT
IRQPEQKMLREAHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789969, Length=399, Percent_Identity=99.2481203007519, Blast_Score=786, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44660; Mature: 44529

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEIFPFYYCRNTAMTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPV
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCHHHCCCCCCH
SQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEH
AGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTRLLETVGLE
HCHHEEECCCCCCEEEHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
KTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
ACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITI
HHHHHHEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCCHHEEEEEHH
GQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHCCCEE
YLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SAEIFPFYYCRNTAMTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPV
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCHHHCCCCCCH
SQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEH
AGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTRLLETVGLE
HCHHEEECCCCCCEEEHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
KTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
ACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITI
HHHHHHEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCCHHEEEEEHH
GQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHCCCEE
YLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]