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The map label for this gene is tsx [H]

Identifier: 218692225

GI number: 218692225

Start: 4583776

End: 4584636

Strand: Reverse

Name: tsx [H]

Synonym: ECED1_4644

Alternate gene names: 218692225

Gene position: 4584636-4583776 (Counterclockwise)

Preceding gene: 218692226

Following gene: 218692222

Centisome position: 88.0

GC content: 39.37

Gene sequence:

>861_bases
ATGTATATAAAAAAGCACTGGATAGCTTTATCCATTCTATTAATACCTTGCATTGGAAACGCTCAGGAAATTAAAATTGA
TGAAAGCTGGTTACATCAAAGCTTGAATGTCATTGGTCGCACAGACTCTCGCTTTGGCCCAAGACTGACTAACGACCTCT
ACCCTGAATATACTGTAGCAGGAAGAAAAGACTGGTTTGATTTTTATGGTTATGTTGATCTACCGAAATTCTTTGGCGTC
GGCAGTCACTATGATGTTGGGATCTGGGATGAGGGCTCACCACTATTTACGGAAATAGAACCTCGGTTTTCCATTGACAA
ATTGACCGGATTAAATCTTGCGTTCGGCCCATTTAAAGAATGGTTCATTGCAAACAACTATGTCTATGATATGGGTGACA
ACCAGTCATCCCGGCAAAGTACATGGTATATGGGGCTTGGTACAGATATCGACACGGGTCTACCAATTAAGCTTTCTGCC
AATATATACGCCAAGTATCAGTGGCAAAACTATGGTGCCGCTAATGAAAATGAATGGGACGGATATCGATTCAAAATAAA
ATATAGCATCCCTCTTACAAATTTATTCGGAGGGCGATTGGTATACAATAGTTTTACTAACTTTGATTTTGGCTCCGATC
TTGCGGACAAGTCACACAATAATAAACGAACCAGTAATGCTATTGCTTCAAGCCATATCCTTTCCCTTCTATATGAACAC
TGGAAATTTGCATTTACACTACGTTATTTTCACAACGGTGGACAATGGAATGCGGGAGAGAAGGTTAACTTCGGAGATGG
TCCATTTGAATTAAAAAATACAGGATGGGGAACCTATACTACTATTGGTTATCAATTTTAA

Upstream 100 bases:

>100_bases
ATGCGGGTAGAAGTAAGCAAATAACAAAAACTTATAATACCATTCATTCACTGGATGACATTATTTCTCTCTAAATCAAC
AATATATAAGAGATATATTT

Downstream 100 bases:

>100_bases
ATTAGGTGACATTTTAGATATTGTTACTTAATGTCATTTTGTAATTGTCATTAATAACTTCACCATTCACTCTGTTACTT
CATCGCTCAACACAAAAGCC

Product: nucleoside channel phage T6/colicin K receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVAGRKDWFDFYGYVDLPKFFGV
GSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKEWFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSA
NIYAKYQWQNYGAANENEWDGYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH
WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF

Sequences:

>Translated_286_residues
MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVAGRKDWFDFYGYVDLPKFFGV
GSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKEWFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSA
NIYAKYQWQNYGAANENEWDGYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH
WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF
>Mature_286_residues
MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVAGRKDWFDFYGYVDLPKFFGV
GSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKEWFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSA
NIYAKYQWQNYGAANENEWDGYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH
WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF

Specific function: Constitutes the receptor for colicin K and phage T6, and functions as substrate-specific channel for nucleosides and deoxynucleosides [H]

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786612, Length=262, Percent_Identity=64.5038167938931, Blast_Score=353, Evalue=8e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003055
- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 32977; Mature: 32977

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVA
CCCCHHHHEEEEEEEECCCCCEEEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEC
GRKDWFDFYGYVDLPKFFGVGSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKE
CCCCCHHHCCEEECHHHHCCCCCCEEEEECCCCCCEEECCCCCCHHHCCCCEEECCCCHH
WFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSANIYAKYQWQNYGAANENEWD
HEEECCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCC
GYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH
CEEEEEEEECCHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF
HEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVA
CCCCHHHHEEEEEEEECCCCCEEEEECHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEC
GRKDWFDFYGYVDLPKFFGVGSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKE
CCCCCHHHCCEEECHHHHCCCCCCEEEEECCCCCCEEECCCCCCHHHCCCCEEECCCCHH
WFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSANIYAKYQWQNYGAANENEWD
HEEECCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCC
GYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH
CEEEEEEEECCHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF
HEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]