| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yeiP [C]
Identifier: 218690321
GI number: 218690321
Start: 2548020
End: 2548592
Strand: Direct
Name: yeiP [C]
Synonym: ECED1_2621
Alternate gene names: 218690321
Gene position: 2548020-2548592 (Clockwise)
Preceding gene: 218690313
Following gene: 218690322
Centisome position: 48.91
GC content: 49.56
Gene sequence:
>573_bases ATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGACATTGATAT TCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAG AGCGTTTCAAAGGTGATGATATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAAC GAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTAT GCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGATGGTCAACTGCTGGCGCTTGAGCTGCCGCAGACCGTTG ATCTGGAAATCGTTGAAACTGCACCAGGCATCAAAGGGGCATCTGCCAGCGCCCGTAACAAACCGGCGACATTGAGCACT GGTCTGGTGATTCAGGTACCAGAATACTTAAGCCCGGGCGAAAAAATTCGTATCCATATCGAAGAACGCCGTTATATGGG TCGTGCTGACTAA
Upstream 100 bases:
>100_bases TTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTGACATTT TTGACTACAGGAATTTTTCG
Downstream 100 bases:
>100_bases CTTCAGCCACATGCAGAAAAGGGATAGCTCAGGCTGTCCCTTTTTTAATTTATTATACCAATCTTCTATTTTGCGCTTCC TGAACACCTTACGCCCGCAA
Product: elongation factor P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGN EYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST GLVIQVPEYLSPGEKIRIHIEERRYMGRAD
Sequences:
>Translated_190_residues MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGN EYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST GLVIQVPEYLSPGEKIRIHIEERRYMGRAD >Mature_189_residues PRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNE YVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTG LVIQVPEYLSPGEKIRIHIEERRYMGRAD
Specific function: Unknown
COG id: COG0231
COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the elongation factor P family [H]
Homologues:
Organism=Escherichia coli, GI87082061, Length=190, Percent_Identity=100, Blast_Score=389, Evalue=1e-110, Organism=Escherichia coli, GI1790590, Length=185, Percent_Identity=28.6486486486486, Blast_Score=87, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015365 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR020599 - InterPro: IPR013185 - InterPro: IPR011897 - InterPro: IPR001059 - InterPro: IPR013852 - InterPro: IPR014722 - InterPro: IPR008991 [H]
Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]
EC number: NA
Molecular weight: Translated: 21533; Mature: 21402
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS01275 EFP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDD CCCHHCCCCCEEEECCCCEEEEEECCCCCCCCCCHHEEEEEEHHHHHCCCEEHHHCCCCC IVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTW HHHHEEEEEEEEEEEEECCCEEEEEECCCCCCEEECHHHHCCCEEECCCCCCCCCEEEEE DGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHI CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEEEHHHCCCCCEEEEEE EERRYMGRAD EHHCCCCCCC >Mature Secondary Structure PRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDD CCHHCCCCCEEEECCCCEEEEEECCCCCCCCCCHHEEEEEEHHHHHCCCEEHHHCCCCC IVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTW HHHHEEEEEEEEEEEEECCCEEEEEECCCCCCEEECHHHHCCCEEECCCCCCCCCEEEEE DGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHI CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEEEHHHCCCCCEEEEEE EERRYMGRAD EHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA