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The map label for this gene is ydiS [H]

Identifier: 218689644

GI number: 218689644

Start: 1859492

End: 1860781

Strand: Direct

Name: ydiS [H]

Synonym: ECED1_1901

Alternate gene names: 218689644

Gene position: 1859492-1860781 (Clockwise)

Preceding gene: 218689643

Following gene: 218689645

Centisome position: 35.69

GC content: 54.88

Gene sequence:

>1290_bases
ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCCGGTAGCGTTGCCGCACTGGTCATGGCGCGAGC
CGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACA
CACTCGAAGCAATTATTCCAGGCTTTGCAGCATCAGCGCCGATAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTA
ACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAACCAGATGTTCCGCAACACGCGTCTTATACCGTATTGCG
TAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCGGGCGTACGCGTCGATGCGC
TGGTTCGTGAAGGAAACAAGGTCACTGGCGTCCAGGCCGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGAT
GGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTTCCGCTTCCAATCCGCATCATTACGCTGTTGGTGTTAAAGA
GGTTATAGGCCTGACACCAGAACAGATCAACGATCGCTTTAATGTTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCG
GTTCCCCTTCTGACGGCCTGATGGGCGGCGGATTCCTCTATACCAACAAGGATTCCGTATCGTTGGGGCTGGTTTGTGGA
TTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCT
GATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAGGGCGGTCTGGCAATGGTGCCGCAGCTGGTTA
ACGATGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACAGTTCGCGGCATGGATTTAGCC
ATTGCATCAGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTGGCGCA
ATACAAACGTGAGCTGGAACAAAGTTGTGTTATGCGCGATATGCAGCATTTCCGCAAGCTCCCGGCGCTGATGGAAAACC
CGCGCCTGTTTAGCCAATACCCACGAATGGTCGCCGACATCATGAACGATATGTTCACCATTGACGGCAAACCAAACCAG
CCGGTACGCAAAATGATCATGGGACACGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAAC
CGCGCTATGA

Upstream 100 bases:

>100_bases
TATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGTCGCTAATTCCCTTTCAACCACATCTCCCGCTGTAAACGCA
GCGGGAAGGGAGCATAACGC

Downstream 100 bases:

>100_bases
GCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATT
TTGGCGGCAAATCCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPIERKVTREKISFL
TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKLPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL

Sequences:

>Translated_429_residues
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPIERKVTREKISFL
TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKLPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL
>Mature_428_residues
SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPIERKVTREKISFLT
EESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADG
VNSMLGRSLGMVSASNPHHYAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCGL
GDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLAI
ASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKLPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQP
VRKMIMGHAKKIGLINLLKDGIKGATAL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=400, Percent_Identity=26.5, Blast_Score=116, Evalue=5e-26,
Organism=Escherichia coli, GI1787991, Length=429, Percent_Identity=97.9020979020979, Blast_Score=848, Evalue=0.0,
Organism=Escherichia coli, GI1786227, Length=429, Percent_Identity=61.7715617715618, Blast_Score=536, Evalue=1e-153,
Organism=Escherichia coli, GI87082155, Length=428, Percent_Identity=42.2897196261682, Blast_Score=336, Evalue=2e-93,
Organism=Caenorhabditis elegans, GI25144720, Length=444, Percent_Identity=25.9009009009009, Blast_Score=117, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6324932, Length=416, Percent_Identity=25.4807692307692, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24652256, Length=408, Percent_Identity=27.2058823529412, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45842; Mature: 45711

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVSASNPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHHCCCCCCCCCE
YAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCG
EEECHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKLPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC
>Mature Secondary Structure 
SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVSASNPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHHCCCCCCCCCE
YAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCG
EEECHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKLPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]