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The map label for this gene is ydiR [H]

Identifier: 218689643

GI number: 218689643

Start: 1858499

End: 1859437

Strand: Direct

Name: ydiR [H]

Synonym: ECED1_1900

Alternate gene names: 218689643

Gene position: 1858499-1859437 (Clockwise)

Preceding gene: 218689642

Following gene: 218689644

Centisome position: 35.67

GC content: 53.25

Gene sequence:

>939_bases
ATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATG
GGGCCAACAGGTGTATGCCATTGTACAAAATACCGAGCAGGCGCAGGCAGTTATGCCTTATGGGCCAAAATGCATTTATG
TTCTTGAGCAAAACGACGCGCTGCAACGTACTGAAAATTACGCCGAAAGCATTGCTGCCCTGCTGAAAGATAAACACCCC
GCTATGTTGCTGTTGGCCGCGACGAAACGTGGTAAAGCTCTGGCAGCACGGTTAAGTGTGCAACTGAATGCGGCGCTGGT
GAACGATGCCACGGCGGTGGATATTATCGATGGTCACATTTGCGCCGAACACCGGATGTATGGCGGGTTAGCGTTCGCTC
AGGAAAAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAGCCGTGCACCCGTGATATCTCTCAT
CAGTGCCCGACAGAAACGGTACCTTATGTTGCCCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCGGCAAG
CAGCGTGGACCTGAGCAAAGCAAAACGTATGGTTGGCGTCGGTCGTGGTCTGGCGGCGCAGGATGACCTGAAAATGGTCC
ACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGATGGAGCGTGAA
CGTTATATCGGTGTCTCCGGCGTGTTGCTGAAATCCGATCTCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATAT
GGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATTAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCGACTACG
GTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGTCGCTAA

Upstream 100 bases:

>100_bases
CGTAAGCACATCATTCTCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTG
AAGCCTACGGAGAAGAAACG

Downstream 100 bases:

>100_bases
TTCCCTTTCAACCACATCTCCCGCTGTAAACGCAGCGGGAAGGGAGCATAACGCATGTCGGATGACAAATTTGATGCCAT
TGTGGTCGGTGCGGGCGTTG

Product: electron transfer flavoprotein subunit YdiR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDALQRTENYAESIAALLKDKHP
AMLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISH
QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRMVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE
RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR

Sequences:

>Translated_312_residues
MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDALQRTENYAESIAALLKDKHP
AMLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISH
QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRMVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE
RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR
>Mature_311_residues
SQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDALQRTENYAESIAALLKDKHPA
MLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISHQ
CPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRMVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERER
YIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=226, Percent_Identity=30.5309734513274, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4503607, Length=226, Percent_Identity=30.5309734513274, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI1787990, Length=312, Percent_Identity=97.7564102564102, Blast_Score=632, Evalue=0.0,
Organism=Escherichia coli, GI1786226, Length=314, Percent_Identity=43.6305732484076, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI87082157, Length=237, Percent_Identity=29.535864978903, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506929, Length=326, Percent_Identity=29.1411042944785, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325261, Length=125, Percent_Identity=42.4, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17136898, Length=231, Percent_Identity=30.7359307359307, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24652801, Length=231, Percent_Identity=30.7359307359307, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 33969; Mature: 33838

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDA
CCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHCEECCCCCEEEEEEECCCH
LQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHI
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEEEHEEEEEEEEECCCCEEEEECCCH
CAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISHQCPTETVPYVAPRHEILCRE
HHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RRAKAASSVDLSKAKRMVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE
HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIY
HHCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCCHHHHHH
KVVPALISQLSR
HHHHHHHHHHCC
>Mature Secondary Structure 
SQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDA
CCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHCEECCCCCEEEEEEECCCH
LQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHI
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHEEEEHEEEEEEEEECCCCEEEEECCCH
CAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISHQCPTETVPYVAPRHEILCRE
HHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH
RRAKAASSVDLSKAKRMVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE
HHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIY
HHCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEECCCCCHHHHHH
KVVPALISQLSR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]