Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yajQ [C]
Identifier: 218688289
GI number: 218688289
Start: 465405
End: 465896
Strand: Direct
Name: yajQ [C]
Synonym: ECED1_0449
Alternate gene names: 218688289
Gene position: 465405-465896 (Clockwise)
Preceding gene: 218688286
Following gene: 218688298
Centisome position: 8.93
GC content: 48.78
Gene sequence:
>492_bases ATGCCATCTTTCGATATTGTCTCTGAAGTTGATCTTCAGGAAGCACGTAACGCGGTCGATAACGCGAGCCGCGAAGTGGA GTCCCGTTTTGACTTCCGTAACGTTGAAGCCTCATTTGAGCTGAATGACGCCAGCAAAACCATCAAAGTGTTGAGCGAGT CCGACTTCCAGGTCAATCAGTTGCTGGATATTCTGCGTGCCAAGTTGCTGAAGCGCGGCATTGAAGGCAGTTCACTGGAT GTACCGGAAAATATCGTTCATAGCGGTAAAACCTGGTTTGTGGAAGCGAAACTGAAACAGGGCATTGAGAGCGCGACTCA GAAGAAAATCGTCAAAATGATCAAAGACAGCAAACTGAAAGTGCAGGCGCAAATTCAGGGCGATGAGATCCGTGTGACGG GCAAATCTCGTGATGATTTACAGGCTGTCATGGCGATGGTACGTGGTAGCGATCTCGGTCAGCCGTTCCAGTTCAAAAAC TTCCGCGATTAA
Upstream 100 bases:
>100_bases CGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTTGGTTATTTAACTTTGCAGGTATTATGCTTCGCATCAA AAATGAAGGGAGAGGAAAAG
Downstream 100 bases:
>100_bases TCGCGACAACCTGTGCTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAACTCAGGAAC TTAGTAGGCCTGATAAGCGT
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLD VPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGSDLGQPFQFKN FRD
Sequences:
>Translated_163_residues MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLD VPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGSDLGQPFQFKN FRD >Mature_162_residues PSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDV PENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGSDLGQPFQFKNF RD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=99.3865030674847, Blast_Score=324, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18374; Mature: 18243
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCHHH LLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEE VQAQIQGDEIRVTGKSRDDLQAVMAMVRGSDLGQPFQFKNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCHHH LLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEE VQAQIQGDEIRVTGKSRDDLQAVMAMVRGSDLGQPFQFKNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA