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The map label for this gene is yajD

Identifier: 218688273

GI number: 218688273

Start: 451591

End: 451938

Strand: Direct

Name: yajD

Synonym: ECED1_0433

Alternate gene names: 218688273

Gene position: 451591-451938 (Clockwise)

Preceding gene: 218688272

Following gene: 218688276

Centisome position: 8.67

GC content: 46.26

Gene sequence:

>348_bases
ATGGCTATCATCCCAAAAAACTATGCGCGGTTAGAAAGCGGCTATCGCGAAAAAGCATTAAAAATCTATCCGTGGGTCTG
CGGTCGCTGTTCCCGCGAGTTTGTTTATTCCAACCTGCGTGAACTTACCGTTCACCACATTGATCACGACCATACTAATA
ACCCGGAAGATGGCAGTAACTGGGAATTACTTTGTCTCTATTGCCACGATCATGAGCATTCGAAATACACCGAAGCGGAT
CAGTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGATTT
GAAAGCGATGATGAACAAGAAGAAGTGA

Upstream 100 bases:

>100_bases
GTCAGAAGATCGGGATTTTTTTTGATGTAAGGTGATTGCGAAAATCCCCGCATCTTGGGAAACTGCGCGTAACCCTACAT
TTCATCCAGGTAACTTTTTC

Downstream 100 bases:

>100_bases
TAAAAAATGCCGGATATGAAATCCGGCATTCTCACAATTAGAAGTTGTAACCTACTACCAGATAACCACCCCAGCCGGTA
GAGCGAACGTTGAAGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEAD
QYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK

Sequences:

>Translated_115_residues
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEAD
QYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
>Mature_114_residues
AIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQ
YGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=115, Percent_Identity=100, Blast_Score=245, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YAJD_ECO57 (P0AAQ4)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85537
- PIR:   G90686
- RefSeq:   NP_286151.1
- RefSeq:   NP_308490.1
- ProteinModelPortal:   P0AAQ4
- EnsemblBacteria:   EBESCT00000026000
- EnsemblBacteria:   EBESCT00000057031
- GeneID:   914565
- GeneID:   957368
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0511
- KEGG:   ecs:ECs0463
- GeneTree:   EBGT00050000010018
- HOGENOM:   HBG489046
- OMA:   ALKMYPH
- ProtClustDB:   PRK11295
- BioCyc:   ECOL83334:ECS0463-MONOMER
- GO:   GO:0005622
- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880
- SMART:   SM00507
- SMART:   SM00355

Pfam domain/function: PF01844 HNH

EC number: NA

Molecular weight: Translated: 13364; Mature: 13233

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN
CCCCCCHHHHHHCCHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
EEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN
CCCCCHHHHHHCCHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
EEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796