Click here to switch to the map view.

The map label for this gene is 218687894

Identifier: 218687894

GI number: 218687894

Start: 18327

End: 19592

Strand: Direct

Name: 218687894

Synonym: ECED1_0017

Alternate gene names: NA

Gene position: 18327-19592 (Clockwise)

Preceding gene: 218687893

Following gene: 218687895

Centisome position: 0.35

GC content: 43.44

Gene sequence:

>1266_bases
GTGGATATGTTTACCAACGTAAATGTTGATTGTTGCAAAACACCAGGATGTAAAAACCTGGGGTTGCTGAATAGCCAGGA
TTATGTCGCACAGGGTAAAAATATTTTATGCCGTGAATGTGGTTACTTGTTTCCAGTGATATCTGAACAGTCGCTTAATA
TTTATCGTAATATTGTGAATCACTCCTGGAGAGGTTTGATTTGCCAATGTTCAACTTGCGGAGGCACGTCCCTCAAAAAA
TATGGATATTCTGCACAAGGCCAGAGAAGAATGTATTGCCATCATTGTGAGAAAACATTTATCACTCTGGAACATGTAAT
TACCATACCACGAGGAGCCCTGTTAGCATTGATGATTGAGCAAGGGGAGGCACTTGCGGATATCAGAAAGTCATTACTTC
TTAACAGCACTGGACTTAGCCGTGAACTGTTAAAATTAGCGCGTGAAGCAAACTATAAAGAAAGTCGACAGTGTTTCCCA
GCTTCTGATATTACCCTGAGTACCCGCGCTTTTCGCGTCAAGTATAATGGTAGCAATAACTCTCTTTATGCTCTTGTTAC
CGCAGAAGAACAAAGCGGCAGGGTGGTTGCCATCTCAACCAATTACTCCCCATCTGCCGTAGAGCAACATTATCAATACA
CATCGAACTATGAAGAGCGTATGTCTCCAGGGACGCTGGCACATCATGTCCAGCGCAAAGAGTTACTTACTATGCGGCGG
GATACCTTGTTTGATATTGATTACGGCCCGGCAGTTTTACATCAAAACGATCCGGGAATGTTGGTAAAACCGGTTCTTCC
GGCATATCGTCATTTTGAACTGGTCAGAATACTGACCGATGAGCATTCCAACAACGTTCAGCATTACCTTGATCACGAAT
GCTTTATATTGGGCGGCTGCCTGATGGCTAATTTGCAGCATATTCATCAAGGTCGCTGCCATATTTCCTTTGTCAAAGAG
CGCGGTGTGGCACCCGCCACCATTGATTTTCCACCGCGATTATTCCTTAGTGGTGGGGTACGAAATAATGTCTGGCGTGC
ATTTTCTAACCGCAATTATTCAATGGCTGTATGCAATCTCACTGGCAGTAAGAAAGTCCGCGAGATGCGGCATGCAACAT
TGAACAGTGCGACGCGTTTTATCCACTTTGTGGAGAACCATCCTTTCCTTATATCATTGAACCGAATGTCTCCTGCGAAT
GTCGTTTCTACATTAGATATCCTCAAACATCTGTGGAATAAAAAACTAGAGCATGGAACAATTTAA

Upstream 100 bases:

>100_bases
ATGTATGCCATTTAGGGCTATGCCCGCCTGATTCAGTGCTACGCATTGAATCAGGTTCTTTTCGCGTTGAACAATATCAA
GATACGGCTATTCGCAGGGA

Downstream 100 bases:

>100_bases
TTATTACTTTTCCGAATAATTTCTTCAGAAATCTTGACATTAGACTATGATTAATGGGGTTTAAGGTCATCAGCCGCCGC
TTTCGGGCATCAAAAACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MDMFTNVNVDCCKTPGCKNLGLLNSQDYVAQGKNILCRECGYLFPVISEQSLNIYRNIVNHSWRGLICQCSTCGGTSLKK
YGYSAQGQRRMYCHHCEKTFITLEHVITIPRGALLALMIEQGEALADIRKSLLLNSTGLSRELLKLAREANYKESRQCFP
ASDITLSTRAFRVKYNGSNNSLYALVTAEEQSGRVVAISTNYSPSAVEQHYQYTSNYEERMSPGTLAHHVQRKELLTMRR
DTLFDIDYGPAVLHQNDPGMLVKPVLPAYRHFELVRILTDEHSNNVQHYLDHECFILGGCLMANLQHIHQGRCHISFVKE
RGVAPATIDFPPRLFLSGGVRNNVWRAFSNRNYSMAVCNLTGSKKVREMRHATLNSATRFIHFVENHPFLISLNRMSPAN
VVSTLDILKHLWNKKLEHGTI

Sequences:

>Translated_421_residues
MDMFTNVNVDCCKTPGCKNLGLLNSQDYVAQGKNILCRECGYLFPVISEQSLNIYRNIVNHSWRGLICQCSTCGGTSLKK
YGYSAQGQRRMYCHHCEKTFITLEHVITIPRGALLALMIEQGEALADIRKSLLLNSTGLSRELLKLAREANYKESRQCFP
ASDITLSTRAFRVKYNGSNNSLYALVTAEEQSGRVVAISTNYSPSAVEQHYQYTSNYEERMSPGTLAHHVQRKELLTMRR
DTLFDIDYGPAVLHQNDPGMLVKPVLPAYRHFELVRILTDEHSNNVQHYLDHECFILGGCLMANLQHIHQGRCHISFVKE
RGVAPATIDFPPRLFLSGGVRNNVWRAFSNRNYSMAVCNLTGSKKVREMRHATLNSATRFIHFVENHPFLISLNRMSPAN
VVSTLDILKHLWNKKLEHGTI
>Mature_421_residues
MDMFTNVNVDCCKTPGCKNLGLLNSQDYVAQGKNILCRECGYLFPVISEQSLNIYRNIVNHSWRGLICQCSTCGGTSLKK
YGYSAQGQRRMYCHHCEKTFITLEHVITIPRGALLALMIEQGEALADIRKSLLLNSTGLSRELLKLAREANYKESRQCFP
ASDITLSTRAFRVKYNGSNNSLYALVTAEEQSGRVVAISTNYSPSAVEQHYQYTSNYEERMSPGTLAHHVQRKELLTMRR
DTLFDIDYGPAVLHQNDPGMLVKPVLPAYRHFELVRILTDEHSNNVQHYLDHECFILGGCLMANLQHIHQGRCHISFVKE
RGVAPATIDFPPRLFLSGGVRNNVWRAFSNRNYSMAVCNLTGSKKVREMRHATLNSATRFIHFVENHPFLISLNRMSPAN
VVSTLDILKHLWNKKLEHGTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47781; Mature: 47781

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMFTNVNVDCCKTPGCKNLGLLNSQDYVAQGKNILCRECGYLFPVISEQSLNIYRNIVN
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCHHHHHCCCEEEECCCCHHHHHHHHHC
HSWRGLICQCSTCGGTSLKKYGYSAQGQRRMYCHHCEKTFITLEHVITIPRGALLALMIE
CCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHEEEEHHEECCCCCEEEEEHH
QGEALADIRKSLLLNSTGLSRELLKLAREANYKESRQCFPASDITLSTRAFRVKYNGSNN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEEEEEECCCC
SLYALVTAEEQSGRVVAISTNYSPSAVEQHYQYTSNYEERMSPGTLAHHVQRKELLTMRR
EEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
DTLFDIDYGPAVLHQNDPGMLVKPVLPAYRHFELVRILTDEHSNNVQHYLDHECFILGGC
CCEEECCCCCEEEECCCCCEEECCCHHHHHHHHHEEEECCCCCCCHHHHHCCCCEEEHHH
LMANLQHIHQGRCHISFVKERGVAPATIDFPPRLFLSGGVRNNVWRAFSNRNYSMAVCNL
HHHHHHHHHCCCEEEEEHHHCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCEEEEEEEC
TGSKKVREMRHATLNSATRFIHFVENHPFLISLNRMSPANVVSTLDILKHLWNKKLEHGT
CCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
I
C
>Mature Secondary Structure
MDMFTNVNVDCCKTPGCKNLGLLNSQDYVAQGKNILCRECGYLFPVISEQSLNIYRNIVN
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCHHHHHCCCEEEECCCCHHHHHHHHHC
HSWRGLICQCSTCGGTSLKKYGYSAQGQRRMYCHHCEKTFITLEHVITIPRGALLALMIE
CCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHEEEEHHEECCCCCEEEEEHH
QGEALADIRKSLLLNSTGLSRELLKLAREANYKESRQCFPASDITLSTRAFRVKYNGSNN
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEEEEEECCCC
SLYALVTAEEQSGRVVAISTNYSPSAVEQHYQYTSNYEERMSPGTLAHHVQRKELLTMRR
EEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHC
DTLFDIDYGPAVLHQNDPGMLVKPVLPAYRHFELVRILTDEHSNNVQHYLDHECFILGGC
CCEEECCCCCEEEECCCCCEEECCCHHHHHHHHHEEEECCCCCCCHHHHHCCCCEEEHHH
LMANLQHIHQGRCHISFVKERGVAPATIDFPPRLFLSGGVRNNVWRAFSNRNYSMAVCNL
HHHHHHHHHCCCEEEEEHHHCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCEEEEEEEC
TGSKKVREMRHATLNSATRFIHFVENHPFLISLNRMSPANVVSTLDILKHLWNKKLEHGT
CCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA