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The map label for this gene is yhjH [H]

Identifier: 218550797

GI number: 218550797

Start: 3585383

End: 3586150

Strand: Reverse

Name: yhjH [H]

Synonym: EFER_3508

Alternate gene names: 218550797

Gene position: 3586150-3585383 (Counterclockwise)

Preceding gene: 218550801

Following gene: 218550796

Centisome position: 78.15

GC content: 50.91

Gene sequence:

>768_bases
TTGATGAAGCAGGTTATTCAGAAACTCAGCATCCCTGATACAAACATTGAAAGCTTACAGGAACGGCGCTTTTGGCTGCA
ATGTGAACGCGCTTATACCTGGCAACCTATCTACCATGTTCATGGGCGACTAATGGCTGTTGAGCCACTGACGGTAGTTA
CACATCCAGATAATCCAGATTTACGTATCGCCCCGGATCGGTATTTTGCAGAAGTTGCCGTCCGTCACCGCGTAGATGTC
ATAAAGGAACAGTTGCAAGCACTGGAACAAAAAGCGTCGTTTTTTCAAAAGAACGATCTGCTGGCCTCGGTGAATGTAGA
CGGCCCGACACTGCTGGCACTTCGCCAGCATCCAGAAATACTGGCATTTATGGAGCGTCATCCCTGGCTACGCTTTGAAC
TTGTTGAACATATCCGTCTGCCGAAAGAGGCCTCGCTGGCATCCCTCTGTGAGTTTGGCCCATTGTGGCTGGACGACTTT
GGTACAGGAATGGCGAATTTCTCAGCCCTGAGCGAAGTACGTTATGACTACATCAAAGTGGCGCGGGAGCTGTTTATCAT
GCTGCGCCAGACCACCGAAGGGCGCAATTTGTTTAACATGTTGTTGCATCTGATGAATCGCTACTGTCGCGGTGTGATCG
TCGAAGGTATCGAGACGCAGGAAGAGTGGCAAGACGTTCAGCGTTCACCAGCCTGTGCTGCACAGGGTTATTTTCTTTCA
CGCCCCGCCCCGCTGGATACACTGGAAGACGCCATCCTGTCGCTGTAG

Upstream 100 bases:

>100_bases
GATTCTGCAATGAATTCACTGATAACGGTGAGTAAAGTTCCGGACATGCGCGCCGATAACCATTGTTGGGTTCAGGCGCA
AATACTTAATCACGGGACAT

Downstream 100 bases:

>100_bases
CTGCCTCATTTTCTGCCTGGCTGGTCTATCTTTAGGACTGGCAAGGAATTAATTGAGGAAGCGAATATGACAAGAGCAGG
CAAAATAACCGCCAGCATCG

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MMKQVIQKLSIPDTNIESLQERRFWLQCERAYTWQPIYHVHGRLMAVEPLTVVTHPDNPDLRIAPDRYFAEVAVRHRVDV
IKEQLQALEQKASFFQKNDLLASVNVDGPTLLALRQHPEILAFMERHPWLRFELVEHIRLPKEASLASLCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFIMLRQTTEGRNLFNMLLHLMNRYCRGVIVEGIETQEEWQDVQRSPACAAQGYFLS
RPAPLDTLEDAILSL

Sequences:

>Translated_255_residues
MMKQVIQKLSIPDTNIESLQERRFWLQCERAYTWQPIYHVHGRLMAVEPLTVVTHPDNPDLRIAPDRYFAEVAVRHRVDV
IKEQLQALEQKASFFQKNDLLASVNVDGPTLLALRQHPEILAFMERHPWLRFELVEHIRLPKEASLASLCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFIMLRQTTEGRNLFNMLLHLMNRYCRGVIVEGIETQEEWQDVQRSPACAAQGYFLS
RPAPLDTLEDAILSL
>Mature_255_residues
MMKQVIQKLSIPDTNIESLQERRFWLQCERAYTWQPIYHVHGRLMAVEPLTVVTHPDNPDLRIAPDRYFAEVAVRHRVDV
IKEQLQALEQKASFFQKNDLLASVNVDGPTLLALRQHPEILAFMERHPWLRFELVEHIRLPKEASLASLCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFIMLRQTTEGRNLFNMLLHLMNRYCRGVIVEGIETQEEWQDVQRSPACAAQGYFLS
RPAPLDTLEDAILSL

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=255, Percent_Identity=74.5098039215686, Blast_Score=407, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 29635; Mature: 29635

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQVIQKLSIPDTNIESLQERRFWLQCERAYTWQPIYHVHGRLMAVEPLTVVTHPDNPD
CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCEEEEECCCCCC
LRIAPDRYFAEVAVRHRVDVIKEQLQALEQKASFFQKNDLLASVNVDGPTLLALRQHPEI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEHHCCHH
LAFMERHPWLRFELVEHIRLPKEASLASLCEFGPLWLDDFGTGMANFSALSEVRYDYIKV
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
ARELFIMLRQTTEGRNLFNMLLHLMNRYCRGVIVEGIETQEEWQDVQRSPACAAQGYFLS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCEECC
RPAPLDTLEDAILSL
CCCCHHHHHHHHHCC
>Mature Secondary Structure
MMKQVIQKLSIPDTNIESLQERRFWLQCERAYTWQPIYHVHGRLMAVEPLTVVTHPDNPD
CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCEEEEECCCCCC
LRIAPDRYFAEVAVRHRVDVIKEQLQALEQKASFFQKNDLLASVNVDGPTLLALRQHPEI
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEHHCCHH
LAFMERHPWLRFELVEHIRLPKEASLASLCEFGPLWLDDFGTGMANFSALSEVRYDYIKV
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
ARELFIMLRQTTEGRNLFNMLLHLMNRYCRGVIVEGIETQEEWQDVQRSPACAAQGYFLS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCEECC
RPAPLDTLEDAILSL
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]