Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is yhjG [H]
Identifier: 218550796
GI number: 218550796
Start: 3583256
End: 3585316
Strand: Reverse
Name: yhjG [H]
Synonym: EFER_3507
Alternate gene names: 218550796
Gene position: 3585316-3583256 (Counterclockwise)
Preceding gene: 218550797
Following gene: 218550792
Centisome position: 78.13
GC content: 53.47
Gene sequence:
>2061_bases ATGACAAGAGCAGGCAAAATAACCGCCAGCATCGTAGGGGCTTTCTTGTTGTTGATCGTCCTGGCTATTGTGTTGATTGC GACCTTTGACTGGAATCGCCTTAAACCGACCATCAACCAGAAAGTCTCTACTGAACTGAATCGCCCGTTCGCTATTCGGG GTGATTTAGGCGTGATATGGGAGCGGCAAAAACAGGAAACCGGCTGGCGCAGCTGGGTGCCGTGGCCCCATATACACGCG GAAGACATCATTCTCGGCAACCCACCAGATATTCCCGAAGTCACAATGGTGCATTTGCCACGCGTAGAGGCAACACTGGC ACCGCTGGCGCTGCTGACTAAAACGGTCTGGCTGCCGTGGGTCAAACTCGAAAAGCCCGACGCGCGCCTGATTCGCCTCT CCGAAAAGAACAATAACTGGACGTTTAATCTCGCCAACGATGACAACAAAGACGCGAATGCAAAGTCGTCGGCGTGGTCG TTTCGGCTGGATAATATTCTGTTCGATCAAGGGCGGATCGCCATTGATGACAAAGTAAGCAAAGCGGATCTGGAAATTTT TGTCGATCCGTTAGGCAAGCCGCTGCCGTTCAGCGAAGTTACCGGTTCGAAAGGGAACGCGGACAAAGAGAAGGTCGGCG ATTACGTTTTTGGCCTGAAGGCGCAGGGACGTTATAACGGCGAACCACTCACGGGTAAGGGGAAAATTGGCGGTATGCTG GCACTACGCGGCGAAGGTACACCGTTTCCGGTACAGGCTGATTTTCGCTCCGGGAATACTCGCGTCGCTTTTGATGGCGT CGTGAATGATCCAATGAAAATGGGCGGGGTCGATTTACGGCTTAAATTTTCTGGCGATTCGCTGGGTGATCTCTATGAAC TGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGGAAAATCG TCGGTCTTTGATTATCGGGGCTTTAACGGGCGCATTGGTGATAGCGATATTCACGGTTCTCTGGTCTACACCACCGGCAA GCCACGGCCAAAGCTGGCAGGTGATGTCGAGTCGCGGCAATTGCGGCTGGCAGATTTAGGGCCGTTAATTGGCGTTGATT CCGGGAAAGGGGCAGAAAAATCAAAGCGGTCTGAACAGAAGAAGGGCGAAAAAAGCGTTCAGCCTGCGGGCAAAGTGCTG CCTTATGACCGCTTCGAAACCGATAAATGGGACGTTATGGATGCCGATGTTCGCTTCAAAGGGCGACGCATTGAACATGG CAGTAGTCTGCCGATTAGCGATCTTTCTACTCATATCATCCTCAAAAATGCTGACCTGCGCCTGCAACCGCTGAAATTTG GCATGGCGGGCGGCAGCATTGCGGCGAATATTCATCTGGAGGGCGATAAAAAACCGATGCAGGGGCGGGCGGATATTCAG GCTCGTCGGCTGAAATTGAAAGAACTGATGCCCGATGTGGAACTGATGCAGAAGACGCTGGGGGAAATGAACGGTGACGC GGAACTACGCGGTAGCGGTAACTCGGTGGCGGCGCTTTTAGGCAACAGTAACGGCAACCTGAAACTGTTGATGAATGACG GGCTGGTGAGCCGCAACCTGATGGAGATTGTTGGGCTGAATGTCGGCAACTACATTGTCGGTGCGATATTTGGTGACGAT GAGGTGCGGGTGAACTGCGCGGCGGCGAATCTGGATATTGCCAACGGCGTGGCGCGTCCGCAGATTTTCGCTTTTGATAC CGAGAATGCGTTGATCAATGTTACCGGCACGGCAAGTTTTGCTTCGGAACAGCTGGATTTAACTATCGATCCAGAAAGTA AAGGGATTCGCATTATCACGCTGCGTTCGCCGCTGTATGTGCGTGGGACGTTTAAAAATCCGCAGGCTGGGGTGAAAGCC GGGCCGTTGATTGCCCGTGGTGCTGTTGCGGCGGCACTGGCAACGCTGGTTACGCCAGCGGCAGCATTGCTGGCACTGAT CTCACCTTCCGAAGGGGAGGCTAATCAGTGCCGGACAATTTTGTCGCAGATGAAGAAGTGA
Upstream 100 bases:
>100_bases GGATACACTGGAAGACGCCATCCTGTCGCTGTAGCTGCCTCATTTTCTGCCTGGCTGGTCTATCTTTAGGACTGGCAAGG AATTAATTGAGGAAGCGAAT
Downstream 100 bases:
>100_bases TGATAGTTGCCGGATGTCTGACATCCGGCAGTTAAAACGACTACAACGACTGGTGCCGCGTCTCATGCGTTAACAGCAGG GCAATTAACGTCAGTCCGGC
Product: outer membrane biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MTRAGKITASIVGAFLLLIVLAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQETGWRSWVPWPHIHA EDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWS FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGML ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTGKS SVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVL PYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDD EVRVNCAAANLDIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKA GPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Sequences:
>Translated_686_residues MTRAGKITASIVGAFLLLIVLAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQETGWRSWVPWPHIHA EDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWS FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGML ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTGKS SVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVL PYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDD EVRVNCAAANLDIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKA GPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK >Mature_685_residues TRAGKITASIVGAFLLLIVLAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIWERQKQETGWRSWVPWPHIHAE DIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWVKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWSF RLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGMLA LRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTGKSS VFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLP YDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQA RRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDE VRVNCAAANLDIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAG PLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=686, Percent_Identity=97.667638483965, Blast_Score=1331, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 74446; Mature: 74315
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAGKITASIVGAFLLLIVLAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCEEEECCCCEEE ERQKQETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW ECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCE VKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWSFRLDNILFDQGRIAIDDKVS EEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEECCCCC KADLEIFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGML CCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLP EECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHCEEECC DTPPFETDGRLVAKIDTGKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQ CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCE LRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFK EEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEC GRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ CEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNL HHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCCCHHHH MEIVGLNVGNYIVGAIFGDDEVRVNCAAANLDIANGVARPQIFAFDTENALINVTGTASF HHHHCCCCCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCEEEEEECCCEEEEEEECCCC ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPA CCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AALLALISPSEGEANQCRTILSQMKK HHHHEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRAGKITASIVGAFLLLIVLAIVLIATFDWNRLKPTINQKVSTELNRPFAIRGDLGVIW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHCCCCEEEECCCCEEE ERQKQETGWRSWVPWPHIHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW ECCHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCE VKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKSSAWSFRLDNILFDQGRIAIDDKVS EEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEECCCCC KADLEIFVDPLGKPLPFSEVTGSKGNADKEKVGDYVFGLKAQGRYNGEPLTGKGKIGGML CCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLP EECCCCCCCCEEECCCCCCEEEEECCCCCCCHHHCCEEEEEEECCCCCCCHHHHCEEECC DTPPFETDGRLVAKIDTGKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLAGDVESRQ CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCE LRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFK EEEECCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEC GRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ CEEECCCCCCCHHHCCEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNL HHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCEEEEECCCCCHHHH MEIVGLNVGNYIVGAIFGDDEVRVNCAAANLDIANGVARPQIFAFDTENALINVTGTASF HHHHCCCCCCEEEEEEECCCCEEEEEEEECCCHHCCCCCCEEEEEECCCEEEEEEECCCC ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPA CCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AALLALISPSEGEANQCRTILSQMKK HHHHEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]