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The map label for this gene is yhjJ [H]

Identifier: 218550801

GI number: 218550801

Start: 3591448

End: 3592944

Strand: Reverse

Name: yhjJ [H]

Synonym: EFER_3512

Alternate gene names: 218550801

Gene position: 3592944-3591448 (Counterclockwise)

Preceding gene: 218550802

Following gene: 218550797

Centisome position: 78.3

GC content: 52.1

Gene sequence:

>1497_bases
ATGCAGGGCACAAAAATTCGACTTTTAGCGGGCGGTTTGCTGGTGATGGCCACTGCTGGCTATGTGCAGGCAGATGCGCT
CCAGCCTGACCCGGCATGGCAACAGGGGACGCTCTCTAATGGTTTACAGTGGCAAGTGTTAGCCACGCCCCAGCGACCAA
GTGACCGCATTGAGGTCCGTCTGCTGGTAAATACCGGTTCGCTCGCCGAAAGTACCCAACAGAGCGGTTATAGCCATGCC
ATTCCACGTATTGCGCTGACACAAAATGGCGGTCTTGAAACCGCACAGGCCCGTTCATTGTGGCAGCAGGGGGTTGATCC
TAAACGCCCCATGCCGCCGGTAATCGTTTCATACGATTCCACGCTGTTTAATCTTAGTCTGCCAAATAATCGCAACGACT
TACTGAAAGAAGCGTTGTCATATCTGGCGAATATCTCTGGCAACTTAAAAGTGACGCCCGAAACGGTGGCACATGCACTG
CAAAGCCAGGATATGGTGGCAACCTGGCCGTTGGATACCAAAGAAGGTTGGTGGCGCTATCGGCTTAAAGGATCAACGCT
GTTAGGGCATGATCCGGCAGATCCGCTGAAACAGCCGATTGATGCAGAGAAAATTCATGAGTTCTACCAAAAGTGGTACA
CCCCGGATGCGATGACGCTCATTGTGGTGGGGAATGTTGATGCGCGTTCTGTCGCGGAGCAAATCAACAAGACATTTGGC
GAACTGAAAGGTAAACGTCAAACCCCAGCCCCTGTACCGACTCTTTCCCCTCTGCGGGCAGAAGCGGTCAGTATTATGAC
CAATGCTGTACGCGATGACCGGTTGTCGATCATGTGGGATAACCCATGGCAGCCGATCCGTGAGTCTTCGGCCCTACAGC
GTTACTGGCGTGCGGATCTCGCCCGTGAAGCGCTGTTCTGGCATGTTCAGCAAATGCTGAGCAAAAACAACAGTAAAGAT
ATCGGACTGGGCTTTGACTGTCGGGTGCTTTACCTGCGCGCCCAGTGTGCAATCAATATTGAATCGCCCAATGATAAACT
GAATGCGAATCTGAACACGGTTGCCCGCGAACTGGCAAAAGTACGCGACAATGGTCTGCCAGAAGAGGAATTTAATGCGC
TGGTGGCGCAGAAGAAACTTGAACTGCAGAAGCTGTTTGCTACTTATGCGCGTGCTGATACCGACATTTTAATGAGTCAG
CGGATGCGTTCGCTGCAAAACCAGGTGGTGGATATCGCGCCGGAGCAGTATCAGAAACTGCGCCAGGATTTCCTTAATAG
CCTGACTGTTGAAATGTTGAATCAGGATCTGCGTCAGCAGCTCTCCCGAGAAATGGCATTGATTCTGTTGCAACCTAAAG
GTGAGCCGGAATACAACATGAAGGAGCTGCAAGCGACGTGGGATCAAATTATGGCACCGAAACCAGCAGCCGCTCCCGCC
GCTGTTGAGACAGATGACGTGCATCCGGAAGTTTCAGATATTCCGCCAGCACAGTAA

Upstream 100 bases:

>100_bases
CATGTTCTTGCGGTCTAACACGAAGTGTTTTTAACGTCATATTCAGGCTGACCACATCCGGCCAGTCTTTTATTACCAGG
AATGTTGATCAGGGGTTCAC

Downstream 100 bases:

>100_bases
TAACAAGCCCGGTAGCATTTTCCCATGCTACCGGGTTTAATGGTAATTAATCAGTTAGCGTTTTATCAGAGTTTTATTTT
TCCATTGCATGACGGTAGCA

Product: zinc-dependent peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MQGTKIRLLAGGLLVMATAGYVQADALQPDPAWQQGTLSNGLQWQVLATPQRPSDRIEVRLLVNTGSLAESTQQSGYSHA
IPRIALTQNGGLETAQARSLWQQGVDPKRPMPPVIVSYDSTLFNLSLPNNRNDLLKEALSYLANISGNLKVTPETVAHAL
QSQDMVATWPLDTKEGWWRYRLKGSTLLGHDPADPLKQPIDAEKIHEFYQKWYTPDAMTLIVVGNVDARSVAEQINKTFG
ELKGKRQTPAPVPTLSPLRAEAVSIMTNAVRDDRLSIMWDNPWQPIRESSALQRYWRADLAREALFWHVQQMLSKNNSKD
IGLGFDCRVLYLRAQCAINIESPNDKLNANLNTVARELAKVRDNGLPEEEFNALVAQKKLELQKLFATYARADTDILMSQ
RMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSREMALILLQPKGEPEYNMKELQATWDQIMAPKPAAAPA
AVETDDVHPEVSDIPPAQ

Sequences:

>Translated_498_residues
MQGTKIRLLAGGLLVMATAGYVQADALQPDPAWQQGTLSNGLQWQVLATPQRPSDRIEVRLLVNTGSLAESTQQSGYSHA
IPRIALTQNGGLETAQARSLWQQGVDPKRPMPPVIVSYDSTLFNLSLPNNRNDLLKEALSYLANISGNLKVTPETVAHAL
QSQDMVATWPLDTKEGWWRYRLKGSTLLGHDPADPLKQPIDAEKIHEFYQKWYTPDAMTLIVVGNVDARSVAEQINKTFG
ELKGKRQTPAPVPTLSPLRAEAVSIMTNAVRDDRLSIMWDNPWQPIRESSALQRYWRADLAREALFWHVQQMLSKNNSKD
IGLGFDCRVLYLRAQCAINIESPNDKLNANLNTVARELAKVRDNGLPEEEFNALVAQKKLELQKLFATYARADTDILMSQ
RMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSREMALILLQPKGEPEYNMKELQATWDQIMAPKPAAAPA
AVETDDVHPEVSDIPPAQ
>Mature_498_residues
MQGTKIRLLAGGLLVMATAGYVQADALQPDPAWQQGTLSNGLQWQVLATPQRPSDRIEVRLLVNTGSLAESTQQSGYSHA
IPRIALTQNGGLETAQARSLWQQGVDPKRPMPPVIVSYDSTLFNLSLPNNRNDLLKEALSYLANISGNLKVTPETVAHAL
QSQDMVATWPLDTKEGWWRYRLKGSTLLGHDPADPLKQPIDAEKIHEFYQKWYTPDAMTLIVVGNVDARSVAEQINKTFG
ELKGKRQTPAPVPTLSPLRAEAVSIMTNAVRDDRLSIMWDNPWQPIRESSALQRYWRADLAREALFWHVQQMLSKNNSKD
IGLGFDCRVLYLRAQCAINIESPNDKLNANLNTVARELAKVRDNGLPEEEFNALVAQKKLELQKLFATYARADTDILMSQ
RMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSREMALILLQPKGEPEYNMKELQATWDQIMAPKPAAAPA
AVETDDVHPEVSDIPPAQ

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Escherichia coli, GI1789946, Length=498, Percent_Identity=89.9598393574297, Blast_Score=922, Evalue=0.0,
Organism=Escherichia coli, GI1787770, Length=493, Percent_Identity=21.9066937119675, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 55884; Mature: 55884

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTKIRLLAGGLLVMATAGYVQADALQPDPAWQQGTLSNGLQWQVLATPQRPSDRIEVR
CCCCEEEEEECCCEEEHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
LLVNTGSLAESTQQSGYSHAIPRIALTQNGGLETAQARSLWQQGVDPKRPMPPVIVSYDS
EEEECCCHHHHHHHCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECC
TLFNLSLPNNRNDLLKEALSYLANISGNLKVTPETVAHALQSQDMVATWPLDTKEGWWRY
EEEEEECCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCEEEECCCCCCCCCEEE
RLKGSTLLGHDPADPLKQPIDAEKIHEFYQKWYTPDAMTLIVVGNVDARSVAEQINKTFG
EEECCEEECCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
ELKGKRQTPAPVPTLSPLRAEAVSIMTNAVRDDRLSIMWDNPWQPIRESSALQRYWRADL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
AREALFWHVQQMLSKNNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNANLNTVARELAK
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
VRDNGLPEEEFNALVAQKKLELQKLFATYARADTDILMSQRMRSLQNQVVDIAPEQYQKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RQDFLNSLTVEMLNQDLRQQLSREMALILLQPKGEPEYNMKELQATWDQIMAPKPAAAPA
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AVETDDVHPEVSDIPPAQ
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGTKIRLLAGGLLVMATAGYVQADALQPDPAWQQGTLSNGLQWQVLATPQRPSDRIEVR
CCCCEEEEEECCCEEEHCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
LLVNTGSLAESTQQSGYSHAIPRIALTQNGGLETAQARSLWQQGVDPKRPMPPVIVSYDS
EEEECCCHHHHHHHCCCHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECC
TLFNLSLPNNRNDLLKEALSYLANISGNLKVTPETVAHALQSQDMVATWPLDTKEGWWRY
EEEEEECCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCEEEECCCCCCCCCEEE
RLKGSTLLGHDPADPLKQPIDAEKIHEFYQKWYTPDAMTLIVVGNVDARSVAEQINKTFG
EEECCEEECCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
ELKGKRQTPAPVPTLSPLRAEAVSIMTNAVRDDRLSIMWDNPWQPIRESSALQRYWRADL
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
AREALFWHVQQMLSKNNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNANLNTVARELAK
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH
VRDNGLPEEEFNALVAQKKLELQKLFATYARADTDILMSQRMRSLQNQVVDIAPEQYQKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RQDFLNSLTVEMLNQDLRQQLSREMALILLQPKGEPEYNMKELQATWDQIMAPKPAAAPA
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AVETDDVHPEVSDIPPAQ
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 9298646 [H]