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The map label for this gene is yedJ [H]

Identifier: 218549285

GI number: 218549285

Start: 1993345

End: 1994034

Strand: Reverse

Name: yedJ [H]

Synonym: EFER_1945

Alternate gene names: 218549285

Gene position: 1994034-1993345 (Counterclockwise)

Preceding gene: 218549286

Following gene: 218549284

Centisome position: 43.46

GC content: 51.88

Gene sequence:

>690_bases
ATGGACATATCACACTGGCAAACGCAATTTGAATCCTGGCTCACGCGCCATCACCAACAGCTTGATGCCGCCCATGACAT
CGCTCACTTTCGCCGTGTCTGGGCGACATCGCAAAAACTGGCGGCAGATCATCCCGTCGATAAGTTGGTGATCCTGACCG
CCTGTTACTTTCACGATCTGATCAGTCTGGCGAAAAATCATCCCGAACGTCATCGCTCATCTATCCTTGCTGCGCAAGAG
ACGGCGCGCGTGCTCAGGCAACAATTTCCCCTGTTTCCGGCTGATAAAATCCCGGCGGTGTGCCATGCCATTGAAGCGCA
TAGCTTTAGCGCAAAAATCCCCCCGCAAAGCCTGGAAGCGAAAATAGTTCAGGATGCAGACAGACTGGAGGCGCTGGGGG
CGATTGGTCTGGCACGGGTATTTGCTGTTTCTGGCGCACTGGGGGTGGCACTGTTTGATGCCAACGATCCCTTCGCCCTG
CATCGCTCACTGAACGACAAACAGTATGCTCTCGACCATTTTCAGATGAAGCTATTAACCTTACCGGAAACCATGCAAAC
CCCACTGGGTAAACAACTCGCCCGGAAAAATGCGGATTTCCTCGTGACGTTTATGGCGAAGTTGAGTGCGGAATTAAACG
GCGACTATGATTCGTTGGATCAAAACGTTATCTGCACATTTACTCGATAA

Upstream 100 bases:

>100_bases
CTTGGTGGCATCGCCTGGTATACCGGACCACGCAACTGCCGCAGGTGAAGCAAAGGCTGAAAATTGCTAAGGTGGCCTTG
CGTAAACATTCGGAGGCGCA

Downstream 100 bases:

>100_bases
ATCATCAGCATAAGGACGTTGCAAATGGCCGATGTTCACGATAAAGCCACACGTAGCAAAAACATGCGGGCCATCGCGAC
CCGCGACACCGCCATCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDISHWQTQFESWLTRHHQQLDAAHDIAHFRRVWATSQKLAADHPVDKLVILTACYFHDLISLAKNHPERHRSSILAAQE
TARVLRQQFPLFPADKIPAVCHAIEAHSFSAKIPPQSLEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDANDPFAL
HRSLNDKQYALDHFQMKLLTLPETMQTPLGKQLARKNADFLVTFMAKLSAELNGDYDSLDQNVICTFTR

Sequences:

>Translated_229_residues
MDISHWQTQFESWLTRHHQQLDAAHDIAHFRRVWATSQKLAADHPVDKLVILTACYFHDLISLAKNHPERHRSSILAAQE
TARVLRQQFPLFPADKIPAVCHAIEAHSFSAKIPPQSLEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDANDPFAL
HRSLNDKQYALDHFQMKLLTLPETMQTPLGKQLARKNADFLVTFMAKLSAELNGDYDSLDQNVICTFTR
>Mature_229_residues
MDISHWQTQFESWLTRHHQQLDAAHDIAHFRRVWATSQKLAADHPVDKLVILTACYFHDLISLAKNHPERHRSSILAAQE
TARVLRQQFPLFPADKIPAVCHAIEAHSFSAKIPPQSLEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDANDPFAL
HRSLNDKQYALDHFQMKLLTLPETMQTPLGKQLARKNADFLVTFMAKLSAELNGDYDSLDQNVICTFTR

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=228, Percent_Identity=74.1228070175439, Blast_Score=348, Evalue=2e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25742; Mature: 25742

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISHWQTQFESWLTRHHQQLDAAHDIAHFRRVWATSQKLAADHPVDKLVILTACYFHDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ISLAKNHPERHRSSILAAQETARVLRQQFPLFPADKIPAVCHAIEAHSFSAKIPPQSLEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDANDPFALHRSLNDKQYALDHFQMKLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHC
LPETMQTPLGKQLARKNADFLVTFMAKLSAELNGDYDSLDQNVICTFTR
CCHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC
>Mature Secondary Structure
MDISHWQTQFESWLTRHHQQLDAAHDIAHFRRVWATSQKLAADHPVDKLVILTACYFHDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ISLAKNHPERHRSSILAAQETARVLRQQFPLFPADKIPAVCHAIEAHSFSAKIPPQSLEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDANDPFALHRSLNDKQYALDHFQMKLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHC
LPETMQTPLGKQLARKNADFLVTFMAKLSAELNGDYDSLDQNVICTFTR
CCHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]