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The map label for this gene is yedR [H]

Identifier: 218549286

GI number: 218549286

Start: 1994087

End: 1994374

Strand: Reverse

Name: yedR [H]

Synonym: EFER_1947

Alternate gene names: 218549286

Gene position: 1994374-1994087 (Counterclockwise)

Preceding gene: 218549292

Following gene: 218549285

Centisome position: 43.46

GC content: 53.12

Gene sequence:

>288_bases
ATGGAGAGCGTCAAATCTATGGAAACAAGAACCTCGCGTAGCCCCGGTGGCAAACTGGCGCTATGTGCCTTTTATGCCTG
GTGCATCTACTTTGCATGGGCGATGGTGCGTTATATCTGGACCATCAGCTCACTACAGTCTGCGCCTATCGCTGGCTTCG
AAAGCGATTTAGGTTCCACCAGTGGAAAATGGCTGGGTGCATTGCTGGGCTTTATGATATTTGCCCTGGTAGGTGCAATC
CTTGGTGGCATCGCCTGGTATACCGGACCACGCAACTGCCGCAGGTGA

Upstream 100 bases:

>100_bases
GTGGGTGTATGAATTGTGTAACAAGCAAAGGCAAAAGGGTAGAAAAGCGTGAGTTACTTCACATAAAATGAGAGGGCTTG
TGTTATGGGTAACAACATAA

Downstream 100 bases:

>100_bases
AGCAAAGGCTGAAAATTGCTAAGGTGGCCTTGCGTAAACATTCGGAGGCGCAATGGACATATCACACTGGCAAACGCAAT
TTGAATCCTGGCTCACGCGC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MESVKSMETRTSRSPGGKLALCAFYAWCIYFAWAMVRYIWTISSLQSAPIAGFESDLGSTSGKWLGALLGFMIFALVGAI
LGGIAWYTGPRNCRR

Sequences:

>Translated_95_residues
MESVKSMETRTSRSPGGKLALCAFYAWCIYFAWAMVRYIWTISSLQSAPIAGFESDLGSTSGKWLGALLGFMIFALVGAI
LGGIAWYTGPRNCRR
>Mature_95_residues
MESVKSMETRTSRSPGGKLALCAFYAWCIYFAWAMVRYIWTISSLQSAPIAGFESDLGSTSGKWLGALLGFMIFALVGAI
LGGIAWYTGPRNCRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082008, Length=89, Percent_Identity=70.7865168539326, Blast_Score=132, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10423; Mature: 10423

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVKSMETRTSRSPGGKLALCAFYAWCIYFAWAMVRYIWTISSLQSAPIAGFESDLGST
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
SGKWLGALLGFMIFALVGAILGGIAWYTGPRNCRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESVKSMETRTSRSPGGKLALCAFYAWCIYFAWAMVRYIWTISSLQSAPIAGFESDLGST
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
SGKWLGALLGFMIFALVGAILGGIAWYTGPRNCRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]