| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yceG [H]
Identifier: 218549176
GI number: 218549176
Start: 1883622
End: 1884644
Strand: Reverse
Name: yceG [H]
Synonym: EFER_1830
Alternate gene names: 218549176
Gene position: 1884644-1883622 (Counterclockwise)
Preceding gene: 218549177
Following gene: 218549175
Centisome position: 41.07
GC content: 47.12
Gene sequence:
>1023_bases ATGAAAAAATTGTTATTTGTCCTTTTGCTGTTGTTGATTGTACTGGGCATTGCCGCAGGCGTGGGCATGTGGAAAGTTCG TCAGTTCGCTGACAGTAAATTGTTAATTAAAAACGAAGCAATATTTACGCTTAAATCGGGTACTGGCAGATTGGCACTCG GTGAGCAGCTCTACATGGCGAAAATTATCAATCGACCGCGAGTGTTCCAGTGGTTGTTACGTATCGAGCCTGATCTGTCG CGTTTCAAAGCCGGAACGTATCGCTTTACGCCACAAATGACGGTACGCGAGATGCTGCAATTGCTGGAAAGCGGTAAAGA AGCTCAGTTTCCGTTACGAATGGTCGAGGGAATGCGTCTACGCGATTACCTCAAGCAACTACGTGAAGCGCCTTATATCA AACATACCCTGAGCGATGATCAGTACGAAACTGTCGCTAAAGCGTTAGATTTGGAAAAACCTGAGTGGATCGAAGGCTGG TTTTGGCCAGATACCTGGATGTATACCGCAAACACAACCGATGTGGCGTTATTGAAGCGATCGCACCAGAAAATGGTGAA AGTTGTCGATGGTATCTGGGAAAAGCGCGCAGAAGGGTTGCCGTATAAAGATAAAAATGAACTGGTCACCATGGCCTCTA TCATTGAGAAAGAGACTGCGGTAGCCAGTGAACGTGATCGTGTTGCTTCGGTGTTTATTAACCGCTTGCGTACGGGAATG CGTTTACAAACCGATCCTACCGTGATTTACGGTATGGGAGAGCGCTATAATGGCAATCTTTCCCGCGCGGATCTTGAAAC GCCGACGGCTTATAATACCTATACCATCAATGGCCTGCCGCCGGGGGCAATTGCCACACCTGGCGAAGACTCATTACAGG CTGCGGCACATCCGGCGAAAACGCCATATCTCTATTTTGTCGCCGATGGTAAAGGTGGTCATACATTTAACACTAATCTT GCCAGCCACAATCGGTCAGTGCAGGACTATTTAAAAGTGCTTAAGGAAAAAAATGCGCAGTAA
Upstream 100 bases:
>100_bases TGATGCCCGTCATTCCCGTACGCACCTGTGGTGATAAGTTGCTGTCTTCGAGACAATTATTTGAGTTTTTAGCCCCACTT TGTGAGCACCCGAATTCATT
Downstream 100 bases:
>100_bases CTATATCGTCATCGAAGGGCTGGAAGGTGCAGGTAAAACCACTGCGCGTAACGTTGTGGTGGAGACACTTGAGCAACTGG GCATTCGTGAGATGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKKLLFVLLLLLIVLGIAAGVGMWKVRQFADSKLLIKNEAIFTLKSGTGRLALGEQLYMAKIINRPRVFQWLLRIEPDLS RFKAGTYRFTPQMTVREMLQLLESGKEAQFPLRMVEGMRLRDYLKQLREAPYIKHTLSDDQYETVAKALDLEKPEWIEGW FWPDTWMYTANTTDVALLKRSHQKMVKVVDGIWEKRAEGLPYKDKNELVTMASIIEKETAVASERDRVASVFINRLRTGM RLQTDPTVIYGMGERYNGNLSRADLETPTAYNTYTINGLPPGAIATPGEDSLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQDYLKVLKEKNAQ
Sequences:
>Translated_340_residues MKKLLFVLLLLLIVLGIAAGVGMWKVRQFADSKLLIKNEAIFTLKSGTGRLALGEQLYMAKIINRPRVFQWLLRIEPDLS RFKAGTYRFTPQMTVREMLQLLESGKEAQFPLRMVEGMRLRDYLKQLREAPYIKHTLSDDQYETVAKALDLEKPEWIEGW FWPDTWMYTANTTDVALLKRSHQKMVKVVDGIWEKRAEGLPYKDKNELVTMASIIEKETAVASERDRVASVFINRLRTGM RLQTDPTVIYGMGERYNGNLSRADLETPTAYNTYTINGLPPGAIATPGEDSLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQDYLKVLKEKNAQ >Mature_340_residues MKKLLFVLLLLLIVLGIAAGVGMWKVRQFADSKLLIKNEAIFTLKSGTGRLALGEQLYMAKIINRPRVFQWLLRIEPDLS RFKAGTYRFTPQMTVREMLQLLESGKEAQFPLRMVEGMRLRDYLKQLREAPYIKHTLSDDQYETVAKALDLEKPEWIEGW FWPDTWMYTANTTDVALLKRSHQKMVKVVDGIWEKRAEGLPYKDKNELVTMASIIEKETAVASERDRVASVFINRLRTGM RLQTDPTVIYGMGERYNGNLSRADLETPTAYNTYTINGLPPGAIATPGEDSLQAAAHPAKTPYLYFVADGKGGHTFNTNL ASHNRSVQDYLKVLKEKNAQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=340, Percent_Identity=89.1176470588235, Blast_Score=615, Evalue=1e-177,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38721; Mature: 38721
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLFVLLLLLIVLGIAAGVGMWKVRQFADSKLLIKNEAIFTLKSGTGRLALGEQLYMA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCEEEEEECCCCCEEHHHHHHHH KIINRPRVFQWLLRIEPDLSRFKAGTYRFTPQMTVREMLQLLESGKEAQFPLRMVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCHH RDYLKQLREAPYIKHTLSDDQYETVAKALDLEKPEWIEGWFWPDTWMYTANTTDVALLKR HHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCHHCCEECCCCEEEECCCCHHHHHHH SHQKMVKVVDGIWEKRAEGLPYKDKNELVTMASIIEKETAVASERDRVASVFINRLRTGM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLQTDPTVIYGMGERYNGNLSRADLETPTAYNTYTINGLPPGAIATPGEDSLQAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNRSVQDYLKVLKEKNAQ CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKLLFVLLLLLIVLGIAAGVGMWKVRQFADSKLLIKNEAIFTLKSGTGRLALGEQLYMA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCEEEEEECCCCCEEHHHHHHHH KIINRPRVFQWLLRIEPDLSRFKAGTYRFTPQMTVREMLQLLESGKEAQFPLRMVEGMRL HHHCCHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCHHHHCCCHH RDYLKQLREAPYIKHTLSDDQYETVAKALDLEKPEWIEGWFWPDTWMYTANTTDVALLKR HHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCHHCCEECCCCEEEECCCCHHHHHHH SHQKMVKVVDGIWEKRAEGLPYKDKNELVTMASIIEKETAVASERDRVASVFINRLRTGM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLQTDPTVIYGMGERYNGNLSRADLETPTAYNTYTINGLPPGAIATPGEDSLQAAAHPAK EEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCC TPYLYFVADGKGGHTFNTNLASHNRSVQDYLKVLKEKNAQ CCEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]