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The map label for this gene is ydbC [H]

Identifier: 218548947

GI number: 218548947

Start: 1639959

End: 1640819

Strand: Reverse

Name: ydbC [H]

Synonym: EFER_1595

Alternate gene names: 218548947

Gene position: 1640819-1639959 (Counterclockwise)

Preceding gene: 218548948

Following gene: 218548946

Centisome position: 35.76

GC content: 52.85

Gene sequence:

>861_bases
ATGAGCAGCAACACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGG
GGTGTTCGGCCCGCCCAGAGATCGCCACGTCGCTATAACCGTGCTGCGCGAGGCGCTGGCATTGGGCGTCAATCATATTG
ATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACC
ATTGTTACTAAAATTGGTGCGCGGCGTGGAGAGGACGCCTCCTGGTTGCCCGCATTTTCTCCGGCAGAGCTGCAAAAAGC
AGTACACGATAATCTACGTAATCTCGGACTGGAGGTACTGGATGTGGTTAACCTGCGCGTTATGATGGGGGATGGTCATG
GCCCAGCGGAAGGATCGATTGAAGCCAGCCTGACCGTGCTGGCAGAGATGCGACAACAAGGCCTGGTAAAACATATTGGC
CTGAGCAACGTCACACCGACGCAGGTTGCAGAGGCGCGTAAGATTACCGAAATTGTCTGTGTGCAGAACGAATACAACAT
TGCTCATCGTGCTGATGACGCAATGATTGATGCTTTGGCCCGCGATGGTATTGCCTACGTGCCGTTCTTCCCGCTCGGGG
GCTTTACGCCGCTGCAATCCTCCACGCTTTCCGATGTTGCTGCGAGCCTTAATGCGACACCAATGCAGGTGGCGCTGGCG
TGGCTTTTACAGCGTTCACCGAATATTTTGCTGATCCCAGGAACGTCTTCTGTTGCTCATTTACGGGAGAATATGGCCGC
AGAAAAATTGCATCTTTCTGCGGACGTGTTGTCTACGTTGGATGGTATTTCGCGAGAATAA

Upstream 100 bases:

>100_bases
GCAACTCATCCAGTAATCTTGTTTACGCCTTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCCGTT
TTATTACAGGGCAGGGCGCG

Downstream 100 bases:

>100_bases
CGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTTTCTTTTTTAATGGCATGGAGTGCATATGTTTAAGGCCAGGAT
TTGCGGCTGGATACGTTTAC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLEVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMRQQGLVKHIG
LSNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLNATPMQVALA
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSADVLSTLDGISRE

Sequences:

>Translated_286_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLEVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMRQQGLVKHIG
LSNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLNATPMQVALA
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSADVLSTLDGISRE
>Mature_285_residues
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTI
VTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLEVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMRQQGLVKHIGL
SNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLNATPMQVALAW
LLQRSPNILLIPGTSSVAHLRENMAAEKLHLSADVLSTLDGISRE

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=286, Percent_Identity=97.5524475524475, Blast_Score=570, Evalue=1e-164,
Organism=Escherichia coli, GI87081735, Length=316, Percent_Identity=27.2151898734177, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788070, Length=308, Percent_Identity=25.6493506493506, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786400, Length=257, Percent_Identity=27.6264591439689, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788081, Length=260, Percent_Identity=23.0769230769231, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30783; Mature: 30651

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLEVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMRQQGLVKHIGLSNVTPTQVAEARKITEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLNATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSADVLSTLDGISRE
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLEVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMRQQGLVKHIGLSNVTPTQVAEARKITEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLNATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSADVLSTLDGISRE
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]