Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is paaY [H]
Identifier: 218548948
GI number: 218548948
Start: 1641062
End: 1641652
Strand: Reverse
Name: paaY [H]
Synonym: EFER_1596
Alternate gene names: 218548948
Gene position: 1641652-1641062 (Counterclockwise)
Preceding gene: 218548949
Following gene: 218548947
Centisome position: 35.78
GC content: 49.92
Gene sequence:
>591_bases ATGCCAATTTATCAGATAGACGGTCTGACTCCGGTTGTACCAGAAGAGAGTTTTGTTCATCCGACAGCGGTATTGATCGG CGATGTTATTCTCGGCAAGGGCGTTTACGTTGGACCAAATGCCAGTCTGCGTGGCGATTTTGGTCGTATCGTGGTGAAAG ATGGCGCGAACATTCAGGATAATTGCGTTATGCACGGTTTTCCCGAGCAGGATACTGTCGTGGAAGAAGATGGGCATATT GGTCATAGCGCTATCCTTCACGGCTGCATTATCCGCCGCAATGCATTAGTGGGAATGAACGCGGTAGTGATGGACGGTGC GGTGATTGGTGAGAACAGCATTGTTGGCGCATCCGCATTTGTGAAAGCCAAAGCAGAAATGCCTGCTAATTATCTGATTG TCGGCAGCCCGGCGAAAGCGATTCGTGAACTTAGTGATCAGGAGCTGGCATGGAAAAAGCAGGGCACGCATGAGTATCAG GTGCTGGTGACACGTTGTAAGCAGACGTTGCATCAAGTCGAACCATTGCGGGAAGTTGAACATGGCAGGCAGCGTCTGGT ATTTGATGAGAATCTGCGACCGAAACAGTAA
Upstream 100 bases:
>100_bases TCGTTAGTGAAAAAGGTGAAACCTCGGTTGGTGAACTGCCTGCGCCGGGAAGCCTGTATTTTCAACGTTTTGGCGGTTTG AACATTGAACAGGAGGCGTT
Downstream 100 bases:
>100_bases CGTCCAGATGCTGAACGTGCTAATTTTTAGCATGTGATATCTAAACCGCAACGCTGATACAGGTTGCGGTTTTTTATTGC CGAATGCGATACTTCTCGCG
Product: hexapeptide repeat acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVEEDGHI GHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSDQELAWKKQGTHEYQ VLVTRCKQTLHQVEPLREVEHGRQRLVFDENLRPKQ
Sequences:
>Translated_196_residues MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVEEDGHI GHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSDQELAWKKQGTHEYQ VLVTRCKQTLHQVEPLREVEHGRQRLVFDENLRPKQ >Mature_195_residues PIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVEEDGHIG HSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSDQELAWKKQGTHEYQV LVTRCKQTLHQVEPLREVEHGRQRLVFDENLRPKQ
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=196, Percent_Identity=97.4489795918367, Blast_Score=392, Evalue=1e-111, Organism=Escherichia coli, GI87081681, Length=196, Percent_Identity=58.6734693877551, Blast_Score=244, Evalue=4e-66, Organism=Escherichia coli, GI87082240, Length=161, Percent_Identity=32.9192546583851, Blast_Score=95, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011974 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21409; Mature: 21278
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCC NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF CCEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCEECHHHH VKAKAEMPANYLIVGSPAKAIRELSDQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREVE EEECCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH HGRQRLVFDENLRPKQ CCHHEEEECCCCCCCC >Mature Secondary Structure PIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD CEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCC NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF CCEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCEECHHHH VKAKAEMPANYLIVGSPAKAIRELSDQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREVE EEECCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH HGRQRLVFDENLRPKQ CCHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503 [H]