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The map label for this gene is mdoD [H]

Identifier: 218548859

GI number: 218548859

Start: 1539516

End: 1541141

Strand: Direct

Name: mdoD [H]

Synonym: EFER_1504

Alternate gene names: 218548859

Gene position: 1539516-1541141 (Clockwise)

Preceding gene: 218548858

Following gene: 218548860

Centisome position: 33.55

GC content: 49.38

Gene sequence:

>1626_bases
ATGGCGATGGCTGCAGTGTGCGGTACCAGCGGTATTGCATCTCTCTTCTCTCAGGCCGCATTTGCGGCGGAATCTGACAT
CGCTGATGGTCAGTCAGTGCGATTTGATTTCTCTATTTTGCAGTCAATGGCACACGATTTAGCGCAAAAACCGTGGGGCG
GAGCGCCGCGTGACCTGCCGCCAACGCTGGCAACAATGACGCCGCAGGCTTATAACAGTATTCAGTACGACGAACAGCAA
TCCTTATGGCATAACGTTGAAAATCGTCAGTTAGATGCGCAGTTTTTCCATATGGGAATGGGATTCCGTCGTCGGGTCCG
TATGTTCTCGGTCGATCCTGCTACTCATATGGCGCGTGAAATCCATTTCCGCCCTGAGTTATTTAAATACAACGATGCGG
GAGTGGATACAAAACAACTCGAAGGACAGAAAGACCTTGGTTTTGCCGGTTTCCGGGTGTTTAAAGCGCCAGAACTGGCG
AGACGAGATGTGGTGTCCTTTCTCGGTGCCAGTTATTTCCGTGCGGTAGATGATACTTATCAATATGGTTTGTCAGCGCG
CGGTCTGGCCATTGATACCTACACTGATTCAAAAGAAGAGTTCCCGGATTTCACCGCCTTCTGGTTTGATACGGTAAAAC
CAGGTTCAACGACCTTTACCGTTTATGCGTTACTCGATAGCCCAAGTATCACCGGAGCGTACAAGTTTGTTATTCACTGC
GAAAAAACGCAGGTGATTATGGATGTCGAAAACCACTTATATGCGCGTAAAGATATCAAACAACTCGGTATTGCCCCGAT
GACCAGTATGTTCAGCTGCGGCACCAACGAGCGCCGGATGTGTGACACCATTCATCCGCAGATACACGATTCGGACCGCC
TTTCTATGTGGCGAGGGAATGGTGAATGGATTTGCCGTCCGCTGAATAACCCGCAGAAATTACAGTTCAATGCTTATACC
GACGACAATCCTAAAGGGTTTGGTCTGTTGCAATTGGATCGTGATTTTTCACACTACCAGGACATTATGGGCTGGTACAA
CAAGCGCCCGAGTTTGTGGGTAGAACCACGTAACCGCTGGGGGAAGGGAACCATTGGGTTAATGGAGATCCCAACAACGG
GCGAAACGTTGGATAACATTGTTTGTTTCTGGCAACCAGAAAAGGCCATTGAAGCGGGTGATGAGTTGCAATATCAGTAT
CGTCTTTACTGGAGTGCTCGACCGCCTGTTCAGTGCCCACTGGCGCGGGTAATGGCAACACGTACCGGAATGGGAGGCTT
TCCTGAGGGGTGGGCACCGGGTGAGCATTTCCCGGAAAAATGGTCCCGTCGTTTTGCCGTTGATTTTGTCGGTGGTGATT
TAAAAGCGGCTGCTCCGAAAGGTATTGAACCGGTGATCACACTTTCCAGCGGTGAAGCGAAGCAGATTGAGATCCTCTAC
GTTGAACCCATTGATGGTTACCGTATTCAGTTCGACTGGTATCCAACATCTGACTCTACTGACCCAGTTGATATGCGAAT
GTTTCTGCGTTGCCAGGGCGAAGCCATTAGCGAAACCTGGCTATATCAATATTTCCCACCAGCGCCAGATAAACGGCAAT
ATATTGACGATCGCATAATGCGTTAA

Upstream 100 bases:

>100_bases
AGTACGCTCTTGCTGCGGTTAAAGACCAGCGCGGGACCATTCACAAGACCAGAAGGATTCACTTTCAGGTATGGATCGTA
GACGCTTTATTAAGGGTTCA

Downstream 100 bases:

>100_bases
AATTTACCCAACGGCTTTTCCCAACGGAAAAGCCGTTAAAGCCTGCTGATTCGTTTCCGCTCGCATTATTCCCTGTCCTG
ATTGAGTAACCTGAGGTTGT

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MAMAAVCGTSGIASLFSQAAFAAESDIADGQSVRFDFSILQSMAHDLAQKPWGGAPRDLPPTLATMTPQAYNSIQYDEQQ
SLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHMAREIHFRPELFKYNDAGVDTKQLEGQKDLGFAGFRVFKAPELA
RRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGSTTFTVYALLDSPSITGAYKFVIHC
EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYT
DDNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNRWGKGTIGLMEIPTTGETLDNIVCFWQPEKAIEAGDELQYQY
RLYWSARPPVQCPLARVMATRTGMGGFPEGWAPGEHFPEKWSRRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILY
VEPIDGYRIQFDWYPTSDSTDPVDMRMFLRCQGEAISETWLYQYFPPAPDKRQYIDDRIMR

Sequences:

>Translated_541_residues
MAMAAVCGTSGIASLFSQAAFAAESDIADGQSVRFDFSILQSMAHDLAQKPWGGAPRDLPPTLATMTPQAYNSIQYDEQQ
SLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHMAREIHFRPELFKYNDAGVDTKQLEGQKDLGFAGFRVFKAPELA
RRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGSTTFTVYALLDSPSITGAYKFVIHC
EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYT
DDNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNRWGKGTIGLMEIPTTGETLDNIVCFWQPEKAIEAGDELQYQY
RLYWSARPPVQCPLARVMATRTGMGGFPEGWAPGEHFPEKWSRRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILY
VEPIDGYRIQFDWYPTSDSTDPVDMRMFLRCQGEAISETWLYQYFPPAPDKRQYIDDRIMR
>Mature_540_residues
AMAAVCGTSGIASLFSQAAFAAESDIADGQSVRFDFSILQSMAHDLAQKPWGGAPRDLPPTLATMTPQAYNSIQYDEQQS
LWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHMAREIHFRPELFKYNDAGVDTKQLEGQKDLGFAGFRVFKAPELAR
RDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGSTTFTVYALLDSPSITGAYKFVIHCE
KTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTD
DNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNRWGKGTIGLMEIPTTGETLDNIVCFWQPEKAIEAGDELQYQYR
LYWSARPPVQCPLARVMATRTGMGGFPEGWAPGEHFPEKWSRRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYV
EPIDGYRIQFDWYPTSDSTDPVDMRMFLRCQGEAISETWLYQYFPPAPDKRQYIDDRIMR

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=540, Percent_Identity=93.7037037037037, Blast_Score=1077, Evalue=0.0,
Organism=Escherichia coli, GI1787286, Length=505, Percent_Identity=37.8217821782178, Blast_Score=313, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 61799; Mature: 61668

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAAVCGTSGIASLFSQAAFAAESDIADGQSVRFDFSILQSMAHDLAQKPWGGAPRDLP
CCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCC
PTLATMTPQAYNSIQYDEQQSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHMARE
CHHHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEECCHHHHHHHH
IHFRPELFKYNDAGVDTKQLEGQKDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTY
HCCCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
QYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGSTTFTVYALLDSPSITGAYKFVIHC
HHCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEE
EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGN
CCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECC
GEWICRPLNNPQKLQFNAYTDDNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNRW
CCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCC
GKGTIGLMEIPTTGETLDNIVCFWQPEKAIEAGDELQYQYRLYWSARPPVQCPLARVMAT
CCCCEEEEECCCCCCCHHCEEEEECCHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RTGMGGFPEGWAPGEHFPEKWSRRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILY
HCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEE
VEPIDGYRIQFDWYPTSDSTDPVDMRMFLRCQGEAISETWLYQYFPPAPDKRQYIDDRIM
EECCCCEEEEEEEECCCCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHC
R
C
>Mature Secondary Structure 
AMAAVCGTSGIASLFSQAAFAAESDIADGQSVRFDFSILQSMAHDLAQKPWGGAPRDLP
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCC
PTLATMTPQAYNSIQYDEQQSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHMARE
CHHHHCCHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEECCHHHHHHHH
IHFRPELFKYNDAGVDTKQLEGQKDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTY
HCCCCCEEEECCCCCCHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
QYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGSTTFTVYALLDSPSITGAYKFVIHC
HHCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEE
EKTQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGN
CCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEECC
GEWICRPLNNPQKLQFNAYTDDNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNRW
CCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCC
GKGTIGLMEIPTTGETLDNIVCFWQPEKAIEAGDELQYQYRLYWSARPPVQCPLARVMAT
CCCCEEEEECCCCCCCHHCEEEEECCHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
RTGMGGFPEGWAPGEHFPEKWSRRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILY
HCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEE
VEPIDGYRIQFDWYPTSDSTDPVDMRMFLRCQGEAISETWLYQYFPPAPDKRQYIDDRIM
EECCCCEEEEEEEECCCCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA